`fix(io): reconcile with upstream, harden calibration/build paths, and document native 3D input` - #400

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darkclad wants to merge 5 commits into

PolusAI:mainfrom

darkclad:main-io-reorg-4

Commits on Jul 30, 2026

chore(vetting): squash pre-IO vetting/process housekeeping (not part of the IO series)
Demian Vladi
committed
feat(io): native OME-TIFF/OME-Zarr metadata parsing and axis-aware volumetric reads
Demian Vladi
committed
feat(io): per-channel/timeframe addressing, physical-spacing calibration, and Zarr v3/tiled OME-TIFF hardening
Demian Vladi
committed
feat(io): stream oversized 3D volumetric ROIs out-of-core across all feature families
Demian Vladi
committed
fix(io): reconcile with upstream, harden calibration/build paths, and document native 3D input
Demian Vladi
committed