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Pull requests: PolusAI/nyxus

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Pull requests list

fix(io): reconcile with upstream, harden calibration/build paths, and document native 3D input
#400 opened Jul 30, 2026 by darkclad Loading…
feat(io): stream oversized 3D volumetric ROIs out-of-core across all feature families
#399 opened Jul 30, 2026 by darkclad Loading…
feat(io): per-channel/timeframe addressing, physical-spacing calibration, and Zarr v3/tiled OME-TIFF hardening
#398 opened Jul 30, 2026 by darkclad Loading…
feat(io): native OME-TIFF/OME-Zarr metadata parsing and axis-aware volumetric reads
#397 opened Jul 30, 2026 by darkclad Loading…
chore(vetting): oracle-vetting promotions for moments/GLCM/GLRLM/GLSZM/GLDM/morphology/caliper
#396 opened Jul 30, 2026 by darkclad Loading…
Fix 2D out-of-core feature paths to match the in-RAM path
#395 opened Jul 24, 2026 by darkclad Loading…
1
fix(imq): correct FOCUS_SCORE overflow + vet 4 image-quality features vs analytic oracle
#394 opened Jul 23, 2026 by darkclad Loading…
4
fix(gabor): keep filter-response magnitudes real-valued, then vet GABOR vs scikit-image
#393 opened Jul 23, 2026 by darkclad Loading…
fix(morphology): geodetic length/thickness from real perimeter (was size_t-truncated)
#392 opened Jul 23, 2026 by darkclad Loading…
3
test(morphology): vet DIAMETER_EQUAL_PERIMETER + ORIENTATION + EROSIONS_2_VANISH -> 80/113
#391 opened Jul 23, 2026 by darkclad Loading…
test(neighbor): oracle-vet 6 features (analytic + CellProfiler) -> neighbor 8/9
#390 opened Jul 23, 2026 by darkclad Loading…
feat(io): Native 5D IO + True 3D Out-of-Core Featurization
#389 opened Jul 23, 2026 by darkclad Loading…
1
fix(3d-ngldm): DCNU/DCNUN summed the wrong marginal (== GLNU)
#387 opened Jul 20, 2026 by darkclad Loading…
test(gldzm): vet 18 grey-level-distance-zone features vs IBSI -> gldzm 35/36
#386 opened Jul 20, 2026 by darkclad Loading…
chore(main): release nyxus 0.12.0 autorelease: pending
#380 opened Jul 17, 2026 by github-actions Bot Loading…
chore(main): release 1.0.0 autorelease: pending
#344 opened May 13, 2026 by github-actions Bot Loading…
Use RLE to calculate morphological features
#70 opened Nov 12, 2022 by Nicholas-Schaub Loading…
Added RLE fast pass to phase1/2
#66 opened Nov 7, 2022 by Nicholas-Schaub Loading…
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