Add IO helper for processing multiple alignments in a group #92

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gaoj66-roche wants to merge 4 commits into

vgteam:support-load-onlyfrom

gaoj66-roche:promote-secondary

Commits on Jul 15, 2026

Add group-aware parallel iteration for read multimappings

gaoj66-roche
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ona-agent
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Commits on Jul 20, 2026

Remove gaf_grouped_unpaired_for_each_parallel, now unused after GAF secondary promotion was dropped

gaoj66-roche
and
claude
committed

Commits on Jul 21, 2026

Move `grouped_unpaired_for_each_parallel` to `stream.hpp` and remove custom get read callback
gaoj66-roche
committed

Commits on Jul 22, 2026

Add interleaved grouped parallel iterator
gaoj66-roche
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