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Jul 21, 2026 - JavaScript
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vhp4safety
Here are 9 public repositories matching this topic...
Key Event enrichment of gene-expression data against molecular Adverse Outcome Pathways — Fisher/ORA and GSEA with FDR correction, interactive Cytoscape KE networks, batch cross-condition comparison and PDF reports. Consumes the molAOP Builder's mapping API.
flask bioinformatics toxicology cytoscape transcriptomics wikipathways enrichment-analysis gsea fair-data vhp4safety adverse-outcome-pathway
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Jul 28, 2026 - Python
Open Notebook Science scripts for the compound wiki
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Mar 12, 2025 - Jupyter Notebook
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Jun 24, 2026 - Python
Curator-in-the-loop tool for building molecular Adverse Outcome Pathways — maps AOP Key Events to WikiPathways, GO and Reactome using BioBERT semantic ranking, with proposal review, a public REST API and DOI'd Zenodo releases.
flask bioinformatics toxicology sparql gene-ontology wikipathways reactome fair-data biobert vhp4safety adverse-outcome-pathway
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Jul 28, 2026 - Python
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Jul 21, 2026 - Jupyter Notebook
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May 31, 2026 - Groovy
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