tgca

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a collection of notebooks containing analysis and visualization methods with publicly available data

visualization machine-learning cbioportal cancer-genomics pancancer mskcc msk-met met-tropism tgca

RNA-seq analysis of TCGA lung adenocarcinoma (LUAD) data using DESeq2, with biomarker evaluation and PP vs TRU subtype interpretation.

bioinformatics rna-seq cancer-genomics deseq2 transcriptomics luad tgca

Computational drug repurposing for LUAD using TCGA + CMap + multi-omics integration.

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