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An interpretable foundation model of the patient clinical timeline: event forecasting, calibrated time-to-event alerts, and concept-level interpretability, benchmarked head-to-head against tuned GBMs, tabular foundation models, and survival baselines on MIMIC-IV, eICU, and GEMINI via the MEDS standard.
BONSAI Causal: transformer (ModernBERT) pipeline for EHR data in MEDS format, extended for causal inference — cohort matching, joint exposure/outcome finetuning, calibration, IPW/AIPW/TMLE effect estimation and semi-synthetic validation