kmer-analysis

High-performance FASTQ/FASTA quality analysis tool written in Rust — HTML reports, adapter trimming, k-mer analysis, N50/N90, duplication estimation, and real-time TUI

Python CLI tool for k-mer spectra, sequence complexity, Shannon entropy, DUST/Wootton-Federhen low-complexity regions, tandem repeats, and spectra comparisons with self-contained HTML reports and zero third-party dependencies.

This repository contains the scripts and workflows used for the analysis of Fusarium oxysporum f. sp. lactucae (Fola) isolates.