Python implementation of MGC+ channel coding for binary and DNA data storage, including encoding, decoding, simulations, and a DNA file storage codec.
Single Read Reconstruction for DNA Data Storage Using Transformers (official implementation)
Formal framework for DNA-based data storage, focusing on reliability engineering, error-bound modeling, and metabolic tradeoff analysis. Repository intended for posting the simulation results of the original project's source code.
UNACORM - The Unified Evaluation App for DNA Data Storage Codecs by Aleksandar Anžel, Chisom Anyabolu, Leon Wimbes, Luca Staus, Ihsan Tri Heldian, David Sonnabend, Khawla Elhadri, Samuel Becker, Felix Klein, Raffael Schön, Marius Welzel, Michael Schwarz, Bernd Freisleben, Dominik Heider, and Georges Hattab
DNA Fountain Algorithm
Associated repository for the "Is DNA the KEY to Solving the Data Storage Crisis?" 15 minute discourse podcast on YouTube!
Biodegradable Digital Logic & Computational Matter. Simulates and models Biological Processing Units (BPUs) using DNA-based storage and organic protein logic circuits to eliminate global electronic waste (E-waste).
Multi-vendor physically-grounded synthetic DNA dataset generator for DNA data storage research. 7 synthesis profiles (Twist, IDT, DNA Script, Ansa, ETH Zurich, Evonetix), 3 sequencing backends (Illumina, Nanopore, PacBio), 3-layer error injection pipeline with empirical calibration.
Store data in synthetic DNA and get it back. LDPC inner code with belief-propagation and ordered-statistics decoding, Cauchy MDS outer code over GF(2^16). Runs in your browser.
An interactive DNA Digital Data Storage simulator built with Streamlit. Encodes digital assets into biological base pairs (A, C, G, T), maps molecular GC-content density profiles with Plotly, verifies data integrity via MD5 checksums, and decodes sequences back with 100% data fidelity. Optimized for stable server-side file streaming.
A Python tool for encoding files into DNA sequences and decoding them back.
Official implementation of the N-Codon Protocol. A biomimetic digital storage architecture for AI models using DNA-inspired fractal compression and epigenetic weight modulation (.bioAI).
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