📚 Tools and databases for analyzing HLA and VDJ genes.
immuneML is a platform for machine learning analysis of adaptive immune receptor repertoire data.
Accurate Typing of Diverse Immune-Related Gene Families from Long-Read Sequencing Data. It can handle HLA, KIR, IG, TCR, CYP gene families. It supports both WGS and amplicon data. It supports PacBio and Nanopore data.
Standardise TR/MH/IG data
BASIC: BCR and TCR assembly from single cell RNA-seq
Substitution Profiles Using Related Families
Generation probability, diversity, and simulation for AIRR-seq TCR/BCR repertoires, from graph models of decomposed receptor sequences. Python, C-accelerated.
Machine learning for Immune Repertoires
pcr bcr 公主连结bot机器人增强插件 （灵梦记轴插件；灵梦PVP插件：查询公会排名，pcrjjc 竞技场排名追踪提醒；连接yobot）
A three-part R tutorial for single-cell BCR sequence processing and integration with gene expression data, using Immcantation and Seurat
An implementation of Byzantine Chain Replication for Distributed Systems
A RESTful Library Management System built with FastAPI and PostgreSQL for managing books, members, and borrowing records through efficient CRUD operations.
Local, privacy-first pipeline for processing phone call recordings (BCR): transcription, summarization, categorization and safe retention management using faster-whisper and local LLMs.
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