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  1. semantic-scholar-mcp semantic-scholar-mcp Public

    MCP server for Semantic Scholar. 200M+ academic papers in Claude Desktop

    Python 5

  2. uniprot-mcp uniprot-mcp Public

    Model Context Protocol server for UniProt — Swiss-Prot and TrEMBL protein knowledgebase. 41 tools across 8 families with per-query SHA-256 provenance verification and offline replay.

    Python 3

  3. alphafold-sovereign-mcp alphafold-sovereign-mcp Public

    Model Context Protocol server that exposes AlphaFold DB and other public biomedical data sources, persisted to a local SQLite knowledge graph for later querying.

    Python 3

  4. homology-cliff homology-cliff Public

    Biosecurity retrieval compendium — ESM-2 homology cliff analysis, 5 papers, 4 pre-registrations, 9360 per-cell results, SHA-256 manifest

    Python 3

  5. TopoGeoML TopoGeoML Public

    TopoGeomML is a Python first research and engineering stack for topology aware geometric machine learning. The system operationalizes persistent homology, higher order topology, geometric deep lear…

    Python 1