shlienlab

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1. raccoon raccoon Public

   Multi-scale clustering in Python

   Python 6 4

2. WGS_somatic_pipeline WGS_somatic_pipeline Public

   A WDL workflow and wrapper for executing tumour + normal alignment, somatic small variant discovery, somatic structural variant and somatic copy number alteration discovery.

   Perl 3 1

3. SVetect SVetect Public

   A tool for identifying and classifying structural rearrangements and chromoplexy from high throughput sequencing data.

   Python 2 2

4. otter otter Public

   Ensemble of convolutional neural networks for transcriptional classification

   Python 2 2

5. cosmic.cancer.gene.census cosmic.cancer.gene.census Public

   A R package with common functions for annotating and filtering mutation data using the COSMIC cancer gene census

   R 1 1

6. RNAmp RNAmp Public

   RNA Amplification in primary tumors

   R 1