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docs: fix gene count in AnnData getting started tutorial - #289

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docs: fix gene count in AnnData getting started tutorial#289
joncarse wants to merge 1 commit into
scverse:mainfrom
joncarse:docs/fix-anndata-gene-count

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@joncarse

@joncarse joncarse commented Jul 25, 2026

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Summary

  • Correct free-text gene count in the AnnData getting started tutorial from 13714 to 11505 so it matches adata output for the tutorial’s processed PBMC3k dataset.
  • Verified by loading the tutorial h5ad via the notebook’s pooch.retrieve + anndata.read_h5ad path and checking adata.n_vars.

Test plan

  • Confirm markdown after the first adata display says 2638 cells / 11505 genes
  • Confirm notebook still contains stored outputs with 2638 × 11505 and no remaining 13714

Align free-text gene count with the tutorial dataset (11505, not 13714).
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@joncarse
joncarse marked this pull request as ready for review July 25, 2026 13:10
@joncarse
joncarse marked this pull request as draft July 25, 2026 13:17
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