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fix three bugs in dynamics/analysis.py (dropped hinges, IndexError, wrong collectivity norm)
CI
#2235:
Pull request
#2262
synchronize by
steps-re
7m 50s
steps-re:fix/dynamics-hinges-collectivity
steps-re:fix/dynamics-hinges-collectivity
7m 50s
View #2262
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CaviTracer: seed channel searches per chamber, report chamber links, and name outputs after what they hold
CI
#2234:
Pull request
#2270
opened by
briza81
8m 39s
briza81:CaviTracer-multi-seed-channels
briza81:CaviTracer-multi-seed-channels
8m 39s
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ANMD and ClustENM fixes and test fixes
CI
#2233:
Pull request
#2269
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jamesmkrieger
10m 12s
jamesmkrieger:jamesk/anmd-openmm-and-input-checks
jamesmkrieger:jamesk/anmd-openmm-and-input-checks
10m 12s
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Merge pull request #2264 from kontheodosiadis/main
CI
#2232:
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a9fef5f
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karolamik13
8m 26s
main
main
8m 26s
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Merge pull request #2258 from jamesmkrieger/clustenm-multistart
CI
#2230:
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e58c920
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9m 2s
main
main
9m 2s
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ANMD and ClustENM fixes and test fixes
CI
#2229:
Pull request
#2269
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jamesmkrieger
10m 3s
jamesmkrieger:jamesk/anmd-openmm-and-input-checks
jamesmkrieger:jamesk/anmd-openmm-and-input-checks
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ANMD and ClustENM fixes and test fixes
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#2228:
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10m 40s
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ANMD and ClustENM fixes and test fixes
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#2227:
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11m 5s
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ANMD and ClustENM fixes and test fixes
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#2226:
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9m 43s
jamesmkrieger:jamesk/anmd-openmm-and-input-checks
jamesmkrieger:jamesk/anmd-openmm-and-input-checks
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ANMD and ClustENM fixes and test fixes
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#2225:
Pull request
#2269
opened by
jamesmkrieger
10m 17s
jamesmkrieger:jamesk/anmd-openmm-and-input-checks
jamesmkrieger:jamesk/anmd-openmm-and-input-checks
10m 17s
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Trajectory Clustering, Statistical Analysis, and Visualization Tools
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#2224:
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#2264
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kontheodosiadis
8m 35s
kontheodosiadis:main
kontheodosiadis:main
8m 35s
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fix three bugs in dynamics/analysis.py (dropped hinges, IndexError, wrong collectivity norm)
CI
#2222:
Pull request
#2262
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steps-re
9m 13s
steps-re:fix/dynamics-hinges-collectivity
steps-re:fix/dynamics-hinges-collectivity
9m 13s
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Add calcSignatureCavities/calcSignatureChannels for ensemble signatur…
CI
#2218:
Pull request
#2268
opened by
stoneandbone
10m 42s
stoneandbone:feature/signature-cavity-channel-ensemble
stoneandbone:feature/signature-cavity-channel-ensemble
10m 42s
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Signature Cavities & Channels in Cavitracer
CI
#2217:
Pull request
#2267
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stoneandbone
8m 7s
stoneandbone:feature/signature-cavity-channel-ensemble
stoneandbone:feature/signature-cavity-channel-ensemble
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Merge pull request #2266 from karolamik13/prody__main
CI
#2216:
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7969f49
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8m 50s
main
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8m 50s
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CaviTracer - additonal functions and multoprocessing
CI
#2215:
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karolamik13
8m 17s
karolamik13:prody__main
karolamik13:prody__main
8m 17s
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CaviTracer - additonal functions and multoprocessing
CI
#2214:
Pull request
#2266
opened by
karolamik13
8m 11s
karolamik13:prody__main
karolamik13:prody__main
8m 11s
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Merge pull request #2263 from briza81/CaviTracer-parameters-update
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#2211:
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4484614
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7m 52s
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7m 52s
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speed up getMasses by looking up each distinct element once
CI
#2210:
Pull request
#2265
opened by
steps-re
Action required
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steps-re:perf/vectorize-getmasses
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CaviTracer: clearer parameter names, per-residue lining, and output-path fixes
CI
#2208:
Pull request
#2263
opened by
briza81
8m 9s
briza81:CaviTracer-parameters-update
briza81:CaviTracer-parameters-update
8m 9s
View #2263
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fix three bugs in dynamics/analysis.py (dropped hinges, IndexError, wrong collectivity norm)
CI
#2207:
Pull request
#2262
opened by
steps-re
Action required
steps-re:fix/dynamics-hinges-collectivity
steps-re:fix/dynamics-hinges-collectivity
Action required
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Merge pull request #2229 from jamesmkrieger/jamesk/bio_phylo_imports
CI
#2206:
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e456186
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9m 51s
main
main
9m 51s
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Merge pull request #2260 from karolamik13/ProDy-CaviTracer-PoresFromC…
CI
#2205:
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46a4f6e
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9m 48s
main
main
9m 48s
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CaviTracer: Pores reconstruction
CI
#2204:
Pull request
#2260
synchronize by
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8m 45s
karolamik13:ProDy-CaviTracer-PoresFromChannels
karolamik13:ProDy-CaviTracer-PoresFromChannels
8m 45s
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Merge pull request #1922 from jamesmkrieger/sel_numChains
CI
#2203:
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0b7cfc3
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9m 45s
main
main
9m 45s
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