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Cardinal seqr #274

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Merged
EddieLF merged 2 commits into from
Jun 2, 2025
Merged

Cardinal seqr #274

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4221b7f
Update CPG to CaRDinal where appropriate in front end
EddieLF Jun 2, 2025
2b0864e
add two new reasons to Excluded tag
EddieLF Jun 2, 2025
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4 changes: 2 additions & 2 deletions ui/pages/Public/components/FeatureUpdates.jsx
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Expand Up @@ -13,9 +13,9 @@ const getDateFromDateStr = dateStr => (
const FeatureUpdatesFeed = ({ entries }) => (
<div>
<Header key="header" dividing size="huge">
CPG Updates
CaRDinal Updates
<Header.Subheader>
This page serves as an announcement hub for CPG seqr updates, sourced from this
This page serves as an announcement hub for CaRDinal seqr updates, sourced from this
&nbsp;
<a href="https://github.com/populationgenomics/seqr/discussions/categories/feature-updates">GitHub Discussion</a>
.
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2 changes: 1 addition & 1 deletion ui/pages/Public/components/LandingPage.jsx
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Expand Up @@ -106,7 +106,7 @@ const LandingPage = () => (
</List.Item>
<List.Item>
Please use the &nbsp;
<Anchor href="http://github.com/populationgenomics/seqr/issues">CPG&apos;s GitHub issues page</Anchor>
<Anchor href="http://github.com/populationgenomics/seqr/issues">CaRDinal seqr GitHub issues page</Anchor>
&nbsp; to submit bug reports or feature requests
</List.Item>
<List.Item>
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2 changes: 1 addition & 1 deletion ui/pages/Public/components/PrivacyPolicy.jsx
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Expand Up @@ -3,7 +3,7 @@ import { Header, Segment, List } from 'semantic-ui-react'

export default () => (
<Segment basic padded="very">
<Header dividing content="CPG seqr Privacy Policy" subheader="Last Updated 13-MAY-2021" size="huge" />
<Header dividing content="CaRDinal seqr Privacy Policy" subheader="Last Updated 13-MAY-2021" size="huge" />
Please read these terms and conditions carefully before using this site.
<br />

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2 changes: 1 addition & 1 deletion ui/pages/Public/components/TermsOfService.jsx
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Expand Up @@ -3,7 +3,7 @@ import { Header, Segment, List } from 'semantic-ui-react'

export default () => (
<Segment basic padded="very">
<Header dividing content="CPG seqr Terms Of Service" subheader="Last Updated 13-MAY-2021" size="huge" />
<Header dividing content="CaRDinal seqr Terms Of Service" subheader="Last Updated 13-MAY-2021" size="huge" />

Please read these terms of service carefully before using this site.
<br />
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2 changes: 1 addition & 1 deletion ui/pages/SummaryData/components/ExternalAnalysis.jsx
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Expand Up @@ -17,7 +17,7 @@ const UPLOAD_FIELDS = [
component: Select,
options: [
...FAMILY_ANALYSED_BY_DATA_TYPES.map(([value, text]) => ({ value, text })),
{ value: 'AIP' }, { value: 'CPG: Full Talos report' },
{ value: 'AIP' }, { value: 'CaRDinal: Full Talos report' },
],
validate: validators.required,
},
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2 changes: 1 addition & 1 deletion ui/shared/components/panel/view-fields/TagFieldView.jsx
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Expand Up @@ -63,7 +63,7 @@ const METADATA_FIELD_PROPS = {
fluid: true,
allowAdditions: true,
addValueOptions: true,
options: ['Polymorphism', 'Artefact', 'No phenotypic fit'].map(value => ({ value })),
options: ['Polymorphism', 'Artefact', 'No phenotypic fit', 'Irrelevant expression', 'Does not segregate'].map(value => ({ value })),
placeholder: 'Select test types or add your own',
...LIST_FORMAT_PROPS,
},
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