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fix(filesystem): preserve CLI directories when MCP roots are available - #3970

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Christian-Sidak wants to merge 2 commits into
modelcontextprotocol:mainfrom
Christian-Sidak:fix/cli-dirs-override-roots
Closed

fix(filesystem): preserve CLI directories when MCP roots are available#3970
Christian-Sidak wants to merge 2 commits into
modelcontextprotocol:mainfrom
Christian-Sidak:fix/cli-dirs-override-roots

test(filesystem): add tests for CLI directories precedence over MCP r…

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