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Dataset.open(splice_info, var_filter) breaks choose_exonic_variants; with_settings(splice_info, var_filter) works

Status: Open.

#176 In mcvickerlab/GenVarLoader;

· bschilder opened on May 22, 2026

gvl.write exceeds max_mem by >2x on chrom-scale builds (peak >64 GiB with max_mem="32g")

Status: Open.

#162 In mcvickerlab/GenVarLoader;

· bschilder opened on May 18, 2026

Support inserting site-only indels

Status: Open.

#80 In mcvickerlab/GenVarLoader;

· d-laub opened on May 16, 2025

Splicing tests

Status: Open.

#57 In mcvickerlab/GenVarLoader;

· bschilder opened on Apr 15, 2025

Lock GVL files to avoid multiple file creation/deletion in multi-job settings

type: bugSomething isn't workingSomething isn't working

Status: Open.

#21 In mcvickerlab/GenVarLoader;

· d-laub opened on Nov 19, 2024

support different lengths for each type of sequence

type: enhancementNew feature or requestNew feature or request

Status: Open.

#19 In mcvickerlab/GenVarLoader;

· d-laub opened on Sep 14, 2024