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Merged
minhsueh merged 1 commit into from
Aug 12, 2026
Merged

Automated dependency upgrades #543

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95 changes: 48 additions & 47 deletions requirements/ubuntu-latest_py3.11.txt
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Original file line number Diff line number Diff line change
Expand Up @@ -4,69 +4,67 @@
#
# pip-compile --output-file=requirements/ubuntu-latest_py3.11.txt pyproject.toml
#
annotated-types==0.7.0
annotated-types==0.8.0
# via pydantic
arro3-core==0.8.0
arro3-core==0.8.1
# via deltalake
asttokens==3.0.1
asttokens==3.0.2
# via stack-data
bibtexparser==1.4.4
# via pymatgen-core
blake3==1.0.8
blake3==1.0.9
# via emmet-core
blinker==1.9.0
# via flask
boto3==1.43.9
boto3==1.43.70
# via mp-api
botocore==1.43.9
botocore==1.43.70
# via
# boto3
# s3transfer
cachelib==0.14.0
cachelib==0.15.4
# via flask-caching
certifi==2026.4.22
certifi==2026.7.22
# via requests
charset-normalizer==3.4.7
charset-normalizer==3.5.0
# via requests
click==8.4.0
click==8.4.2
# via flask
contourpy==1.3.3
# via matplotlib
cycler==0.12.1
# via matplotlib
dash==3.4.0
# via crystal_toolkit (pyproject.toml)
dash-mp-components==0.5.2rc1
dash-mp-components==0.5.2
# via crystal_toolkit (pyproject.toml)
decorator==5.3.1
# via ipython
deltalake==1.6.0
deltalake==1.5.1
# via mp-api
deprecated==1.3.1
# via deltalake
emmet-core==0.86.4
emmet-core==0.87.1
# via mp-api
executing==2.2.1
# via stack-data
flask==3.1.3
# via
# dash
# flask-caching
flask-caching==2.4.0
flask-caching==2.4.1
# via crystal_toolkit (pyproject.toml)
fonttools==4.63.0
# via matplotlib
frozendict==2.4.7
# via crystal_toolkit (pyproject.toml)
idna==3.15
idna==3.18
# via requests
imageio==2.37.3
imageio==2.37.4
# via scikit-image
importlib-metadata==9.0.0
# via dash
inflect==7.5.0
# via emmet-core
ipython==9.13.0
ipython==9.16.1
# via crystal_toolkit (pyproject.toml)
ipython-pygments-lexers==1.1.1
# via ipython
Expand All @@ -90,37 +88,39 @@ latexcodec==3.0.1
# via pybtex
lazy-loader==0.5
# via scikit-image
lxml==6.1.0
lxml==6.1.1
# via pymatgen-core
markupsafe==3.0.3
# via
# flask
# jinja2
# werkzeug
matplotlib==3.10.9
matplotlib==3.11.1
# via pymatgen-core
matplotlib-inline==0.2.2
# via ipython
monty==2026.5.18
monty==2026.7.16
# via
# emmet-core
# mp-api
# pymatgen-core
more-itertools==11.0.2
more-itertools==11.1.0
# via inflect
mp-api==0.46.1
mp-api==0.46.4
# via crystal_toolkit (pyproject.toml)
mpmath==1.3.0
# via sympy
narwhals==2.21.2
# via plotly
narwhals==2.24.0
# via
# plotly
# scikit-learn
nest-asyncio==1.6.0
# via dash
networkx==3.6.1
# via
# pymatgen-core
# scikit-image
numpy==2.4.5
numpy==2.4.6
# via
# contourpy
# imageio
Expand All @@ -139,30 +139,30 @@ orjson==3.11.9
# via
# mp-api
# pymatgen-core
packaging==26.2
packaging==26.3
# via
# lazy-loader
# matplotlib
# plotly
# scikit-image
palettable==3.3.3
# via pymatgen-core
pandas==3.0.3
pandas==3.0.5
# via pymatgen-core
parso==0.8.7
# via jedi
pexpect==4.9.0
# via ipython
pillow==12.2.0
pillow==12.3.0
# via
# imageio
# matplotlib
# scikit-image
plotly==6.7.0
plotly==6.9.0
# via
# dash
# pymatgen-core
prompt-toolkit==3.0.52
prompt-toolkit==3.0.53
# via ipython
psutil==7.2.2
# via ipython
Expand All @@ -172,7 +172,7 @@ pubchempy==1.0.5
# via emmet-core
pure-eval==0.2.3
# via stack-data
pyarrow==24.0.0
pyarrow==25.0.1
# via mp-api
pybtex==0.26.1
# via emmet-core
Expand All @@ -183,7 +183,7 @@ pydantic==2.13.4
# pymatgen-io-validation
pydantic-core==2.46.4
# via pydantic
pydantic-settings==2.14.1
pydantic-settings==2.15.0
# via
# crystal_toolkit (pyproject.toml)
# emmet-core
Expand All @@ -197,10 +197,11 @@ pymatgen==2026.5.4
# crystal_toolkit (pyproject.toml)
# emmet-core
# mp-api
pymatgen-core==2026.7.31
# via
# pymatgen
# pymatgen-io-validation
pymatgen-core==2026.5.17
# via pymatgen
pymatgen-io-validation==0.1.2
pymatgen-io-validation==0.1.3
# via emmet-core
pyparsing==3.3.2
# via
Expand All @@ -225,11 +226,11 @@ retrying==1.4.2
# via dash
ruamel-yaml==0.19.1
# via monty
s3transfer==0.17.0
s3transfer==0.19.2
# via boto3
scikit-image==0.26.0
# via crystal_toolkit (pyproject.toml)
scikit-learn==1.8.0
scikit-learn==1.9.0
# via crystal_toolkit (pyproject.toml)
scipy==1.17.1
# via
Expand All @@ -252,15 +253,15 @@ threadpoolctl==3.6.0
# via scikit-learn
tifffile==2026.3.3
# via scikit-image
tqdm==4.67.3
tqdm==4.70.0
# via pymatgen-core
traitlets==5.15.0
traitlets==5.16.1
# via
# ipython
# matplotlib-inline
typeguard==4.5.2
typeguard==4.6.0
# via inflect
typing-extensions==4.15.0
typing-extensions==4.16.0
# via
# arro3-core
# blake3
Expand All @@ -273,7 +274,7 @@ typing-extensions==4.15.0
# spglib
# typeguard
# typing-inspection
typing-inspection==0.4.2
typing-inspection==0.4.4
# via
# pydantic
# pydantic-settings
Expand All @@ -283,17 +284,17 @@ urllib3==2.7.0
# via
# botocore
# requests
wcwidth==0.7.0
wcwidth==0.8.2
# via prompt-toolkit
webcolors==25.10.0
# via crystal_toolkit (pyproject.toml)
werkzeug==3.1.8
# via
# dash
# flask
wrapt==2.1.2
wrapt==2.3.0
# via deprecated
zipp==3.23.1
zipp==4.1.0
# via importlib-metadata

# The following packages are considered to be unsafe in a requirements file:
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