qa

Interactive jupyter notebooks for quality assurance checks of resting state and task fMRI data.

rsfmri_qa.ipynb

Used with the outputs from the Nipype resting state preprocessing script found here: https://github.com/nipy/nipype/blob/master/examples/rsfmri_vol_surface_preprocessing_nipy.py

task_qa.ipynb

Used with the outputs from the Nipype subject-level task fMRI script found here: https://github.com/mackeylab/openfmri/blob/openfmri/subject_level/fmri_ants_openfmri.py

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Original repo: https://github.mit.edu/Gablab/qa (contributions from Satra Ghosh)