Scripts for the surgincal outcomes projects for NSQIP-P
Run the nsqip_pipeline.sh file to replicate results which will be stored in the output folder
Assumes the following folder structure
├── NSQIP_codes [where the github code lives]
├── data
│ ├── output
│ └── raw
│ ├── ACS\ NSQIP\ 2012
│ ├── ACS\ NSQIP\ 2013
│ ├── ACS\ NSQIP\ 2014
│ ├── ACS\ NSQIP\ 2015
│ ├── ACS\ NSQIP\ 2016
│ ├── ACS\ NSQIP\ 2017
│ └── ACS\ NSQIP\ 2018
├── figures
├── misc_documents
├── nsqip_extracted_keys
└── output
└── figures