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PCA Initialisation Error: ValueError: Cannot generate PCA initialization because input data, X, is an affinity matrix, not a samples x features matrix.

Status: Open.

#14 In ejohnson643/EMBEDR;

· Ebony-Watson opened on Oct 18, 2022

Curse of dimensionality with Nearest Neighbour approaches?

Status: Open.

#13 In ejohnson643/EMBEDR;

· mr-september opened on May 3, 2022

Errors with reloading EMBEDR, Simes' method, question about figures

Status: Open.

#12 In ejohnson643/EMBEDR;

· Ebony-Watson opened on Apr 15, 2022

EMBEDR cannot be loaded from main folder.

bugSomething isn't workingSomething isn't working

Status: Open.

#10 In ejohnson643/EMBEDR;

· ejohnson643 opened on Dec 28, 2021

n_jobs doesn't propagate to t-SNE and UMAP calculations

bugSomething isn't workingSomething isn't working

Status: Open.

#3 In ejohnson643/EMBEDR;

· ejohnson643 opened on Aug 27, 2021

Assessing UMAP embedding quality and sweeping across n_neighbours parameter

documentationImprovements or additions to documentationImprovements or additions to documentation

enhancementNew feature or requestNew feature or request

Status: Open.

#1 In ejohnson643/EMBEDR;

· ohickl opened on Mar 18, 2021