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.gitignore
.gitignore
 
 
CSE527Poster.pptx
CSE527Poster.pptx
 
 
README
README
 
 
bib.txt
bib.txt
 
 
blosum.txt
blosum.txt
 
 
chromFa_yeast2011.tar.gz
chromFa_yeast2011.tar.gz
 
 
cse527.py
cse527.py
 
 
cse527_project_report.lyx
cse527_project_report.lyx
 
 
figures.py
figures.py
 
 
filetypes.py
filetypes.py
 
 
graph1-zoom.eps
graph1-zoom.eps
 
 
graph1.emf
graph1.emf
 
 
graph1.eps
graph1.eps
 
 
graph1.svg.emf
graph1.svg.emf
 
 
inner_loops.pyx
inner_loops.pyx
 
 
launch.py
launch.py
 
 
nw_innerloop.pyx
nw_innerloop.pyx
 
 
parallel_run.py
parallel_run.py
 
 
sacCer3_yeast2011.2bit
sacCer3_yeast2011.2bit
 
 
sacCer3_yeast2011.desc.csv
sacCer3_yeast2011.desc.csv
 
 
sacCer3_yeast2011.gene.csv
sacCer3_yeast2011.gene.csv
 
 
top30chart.eps
top30chart.eps
 
 
top30results.ods
top30results.ods
 
 
twoBitToFa
twoBitToFa
 
 
util.py
util.py
 
 

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This is a repository of the code and documents for a class project in a
Computational biology class taught at the University of Washington.  It is put
here in case anyone finds it useful.

Contact: jay at uw dot edu

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Files for a final project in Computational Biology at the University of Washington

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