GWAS-Pigmentation

This repository contains scripts used for analyzing the pigmentation project data. It contains R,shell and Python (Jupiter) scripts.

Name		Name	Last commit message	Last commit date
README.md		README.md
adapt-files-for-GCTA-weightedEAF.ipynb		adapt-files-for-GCTA-weightedEAF.ipynb
follow-up.R		follow-up.R
ggmanhattan-function.R		ggmanhattan-function.R
manhattan-plots-tidyverse.R		manhattan-plots-tidyverse.R
pheno-gwas.R		pheno-gwas.R
post-gwas-function.R		post-gwas-function.R
regional-plots.R		regional-plots.R
script-to-filter-zfiles.txt		script-to-filter-zfiles.txt
test-snps-muther.sh		test-snps-muther.sh
test-snps-pancaneqtl.sh		test-snps-pancaneqtl.sh

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