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Ziemert Lab

Translational Genome Mining for Natural Products

16 followers
Germany
https://uni-tuebingen.de/en/fakultaeten/mathematisch-naturwissenschaftliche-fakultaet/fachbereiche/interfakultaere-einrichtungen/imit/arbeitsgruppen/translational-genome-mining-for-natural-products/
@ZiemertLab

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README.md

Welcome to the Ziemert Lab!

This page is under construction

This account belongs to the research group of Nadine Ziemert - Translational Genome Mining for Natural Products.

Popular repositories Loading

ARTS ARTS Public

Antibiotic Resistant Target Seeker (ARTS)

Python 6 2
FunARTS FunARTS Public

Fungal bioActive compound Resistant Target Seeker (FunARTS)

Python 4
PhyloNaP_WebApp PhyloNaP_WebApp Public

JavaScript 3 1
PanBGC-DB PanBGC-DB Public

PanBGC-DB is a comprehensive resource for the exploration of biosynthetic gene cluster (BGC) diversity using a pangenome-inspired framework. It enables users to visualize gene cluster families (GCF…

JavaScript 2 1
FunARTSwebapp FunARTSwebapp Public

Web application to display and log job uploads for the Fungal bioActive compound Resistant Target Seeker (FunARTS)

HTML 1
bgc-atlas-web bgc-atlas-web Public

TypeScript 1 1

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Showing 10 of 15 repositories

GPA_reclassification Public

ZiemertLab/GPA_reclassification's past year of commit activity

Jupyter Notebook 0 0 0 0 Updated Jun 18, 2026
pubmed_product_miner Public
Automated data mining tool to extract natural product names and evidence from PubMed literature snippets

ZiemertLab/pubmed_product_miner's past year of commit activity

Python 0 MIT 0 0 0 Updated Apr 29, 2026
PhyloNaP_WebApp Public

ZiemertLab/PhyloNaP_WebApp's past year of commit activity

JavaScript 3 MIT 1 0 0 Updated Apr 15, 2026
PhyloNaP_createdb Public

ZiemertLab/PhyloNaP_createdb's past year of commit activity

Python 0 0 0 0 Updated Apr 14, 2026
bgc-atlas-web Public

ZiemertLab/bgc-atlas-web's past year of commit activity

TypeScript 1 GPL-3.0 1 0 3 Updated Mar 27, 2026
Lasso Public Forked from Mvgnu/Lasso

ZiemertLab/Lasso's past year of commit activity

HTML 0 MIT 1 0 0 Updated Jan 29, 2026
soil-metagenome-pipeline Public Forked from canerbagci/soil-metagenome-pipeline
a Nextflow DSL2 workflow for soil metagenomics

ZiemertLab/soil-metagenome-pipeline's past year of commit activity

Nextflow 0 GPL-3.0 1 0 0 Updated Sep 19, 2025
PanBGC-DB Public
PanBGC-DB is a comprehensive resource for the exploration of biosynthetic gene cluster (BGC) diversity using a pangenome-inspired framework. It enables users to visualize gene cluster families (GCFs), analyze core and accessory gene content, compute openness metrics, and compare their own BGCs against a curated reference database.

ZiemertLab/PanBGC-DB's past year of commit activity

JavaScript 2 1 0 0 Updated Jul 17, 2025
bgc-atlas-analysis Public

ZiemertLab/bgc-atlas-analysis's past year of commit activity

Java 0 GPL-3.0 1 0 0 Updated Oct 8, 2024
Women-in-NP-Research Public

ZiemertLab/Women-in-NP-Research's past year of commit activity

HTML 0 0 0 0 Updated Mar 26, 2024

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