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convert to cwl: output-prefix support

Status: Open.

#61 In WorkflowConversion/CTDConverter;

· mr-c opened on Mar 15, 2021

gather workflows for end-to-end testing

Status: Open.

#55 In WorkflowConversion/CTDConverter;

· mr-c opened on Jan 25, 2021

Add unit tests for CWL

Status: Open.

#48 In WorkflowConversion/CTDConverter;

· Tomnl opened on Jul 5, 2019

Flags get not properly translated into cwl

Status: Open.

#43 In WorkflowConversion/CTDConverter;

· mwalzer opened on Dec 6, 2018

cwl conversion adds version parameter even if the tool does not have a version parameter

Status: Open.

#42 In WorkflowConversion/CTDConverter;

· mwalzer opened on Dec 6, 2018

defaults render cwl invalid

Status: Open.

#41 In WorkflowConversion/CTDConverter;

· mwalzer opened on Dec 6, 2018

LICENSE says GPL-3, convert.py says Apache-2.0; which is it? :-)

Status: Open.

#39 In WorkflowConversion/CTDConverter;

· mr-c opened on Feb 18, 2018

CWL: \n is not valid YAML, nor do URLs need wrapping in <>

Status: Open.

#37 In WorkflowConversion/CTDConverter;

· mr-c opened on Feb 17, 2018

cwl always needs an output section, even if empty

Status: Open.

#36 In WorkflowConversion/CTDConverter;

· mr-c opened on Feb 10, 2018

Unable to parse CTD from Seqan 2.4.0

Status: Open.

#35 In WorkflowConversion/CTDConverter;

· mr-c opened on Feb 10, 2018

Add support for the <citations> element in Galaxy.

Status: Open.

#33 In WorkflowConversion/CTDConverter;

· chahuistle opened on Oct 20, 2017

add NoFlo support

Status: Open.

#32 In WorkflowConversion/CTDConverter;

· jibe-b opened on Oct 10, 2017