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1. scPertEval scPertEval Public

   scPertEval — reference implementations of evaluation protocols (metrics) for single-cell perturbation studies

   Python 8 1

2. scPertEval-figures scPertEval-figures Public

   Reproduction of the scPertEval preprint figures (DRF table, metric timing, DEG-Jaccard, DEG-concordance)

   Python

3. scPertEval-tutorials scPertEval-tutorials Public

   Jupyter notebook tutorials for scPertEval — fetched automatically by the docs build

   Jupyter Notebook

4. scPertEval-models scPertEval-models Public

   Model integrations and full-scale training/prediction scaffold for reproducing Miller et al. 2025 / Ahlmann-Eltze et al. 2025 eval protocols against scPertEval.

   Python