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Bump scikit-learn from 1.9.0 to 1.9.1 #253

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Merged
amrit110 merged 3 commits into from
Sep 17, 2026
Merged

Bump scikit-learn from 1.9.0 to 1.9.1 #253

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0190791
Bump scikit-learn from 1.9.0 to 1.9.1
dependabot[bot] Sep 14, 2026
6550a1c
Fix mypy and typos lint failures for verbatim cohort scripts
Sep 14, 2026
eb8eb49
Fix duplicate evn key in _typos.toml causing TOML parse error
Sep 16, 2026
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2 changes: 1 addition & 1 deletion .pre-commit-config.yaml
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Expand Up @@ -42,7 +42,7 @@ repos:
entry: python3 -m mypy --config-file pyproject.toml
language: system
types: [python]
exclude: '(tests|scripts/cohort/cohort_check_(mimic|eicu)\.py)'
exclude: 'tests|scripts/cohort/cohort_check_(mimic|eicu)\.py'

- repo: https://github.com/crate-ci/typos
rev: v1
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1 change: 1 addition & 0 deletions _typos.toml
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Expand Up @@ -26,6 +26,7 @@ GAMs = "GAMs"
# scripts/gemini/extract_dry.py's TOP_LAB_CONCEPTS, not a typo for "MUCH".
MCH = "MCH"


[default.extend-identifiers]
# get_rolling_window_indicies is MEDS-Tab's own real, upstream function name
# (genuinely misspelled there, not by us) -- referenced in prose in
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2 changes: 1 addition & 1 deletion pyproject.toml
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Expand Up @@ -32,7 +32,7 @@ dependencies = [
"idna>=3.19",
# Eval metrics only (AUROC/AUPRC/Brier score for concept quality) --
# not used anywhere in the training/inference path itself.
"scikit-learn>=1.7.0",
"scikit-learn>=1.9.1",
]

[project.optional-dependencies]
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