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Terumo-App/terumo-model-binary-glomerulus-hypercellularity

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Terumo: binary classifiers for glomerular data

  • Usage:
  1. Copy all the dataset folders to the data/raw folder.
  2. Run make build_dataset. This will run in two steps:
    1. First, it will arrange the dataset into 6 sub-folders of the data/raw folder, according to class names:
      1. Hypercellularity
      2. Membranous
      3. Sclerosis
      4. Normal
      5. Podocytopathy
      6. Crescent
    2. Then, it will create the 6 copies that will be used to train each binary classifier
  3. (Optional) If you want a test run (of 1 epoch, and only a single model) run make test
  4. Run make train to train all 6 models sequentially, in the order above (Hypercellularity, Membranous, Sclerosis, Normal, Podocytopathy, Crescent)

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