chore(deps): bump the python-dependencies group across 1 directory with 3 updates

[dependabot]

Updates the requirements on pandas, python-dotenv and duckdb to permit the latest version.
Updates pandas to 3.0.5

Release notes

Sourced from pandas's releases.

pandas 3.0.5

We are pleased to announce the release of pandas 3.0.5. This is a patch release in the 3.0.x series and includes some regression fixes and bug fixes. We recommend that all users of the 3.0.x series upgrade to this version.

See the full whatsnew for a list of all the changes.

Pandas 3.0 supports Python 3.11 and higher. The release can be installed from PyPI:

python -m pip install --upgrade pandas==3.0.*

Or from conda-forge

conda install -c conda-forge pandas=3.0

Please report any issues with the release on the pandas issue tracker.

Thanks to all the contributors who made this release possible.

Commits

• e68db09 RLS: 3.0.5
• 0697623 Backport PR #66428: DOC: update whatsnew for 3.0.5 (#66430)
• 5d846d0 Backport PR #66090 on branch 3.0.x (BLD: exclude numpy 2.5.0 when building wh...
• bef7a2b Backport PR #66169 on branch 3.0.x (CI: Fix pyarrow-nightly job (stale nightl...
• 8188eb1 RLS: 3.0.4 (#66079)
• bd35f15 [3.0.x] BUG: fix CoW issue in eval() (#66072)
• 6195872 [backport 3.0.x] BUG: anchor whole alternation in Series.str.match for PyArro...
• 70313be Backport PR #66051 on branch 3.0.x (BUG: fix regression in DataFrame setitem ...
• 57ed3e2 [backport 3.0.x] Bump pypa/cibuildwheel from 3.4.1 to 4.1.0 (#65934) (#66026)
• f9693fc [backport 3.0.x] BUG(pandas 3.0 regression): drop(index=...) doesn't accept N...
• Additional commits viewable in compare view

Updates python-dotenv to 1.2.3

Release notes

Sourced from python-dotenv's releases.

v1.2.3

Fixed

• Strip a leading UTF-8 BOM from .env file contents so the first variable is no longer silently lost when the file is saved with BOM (e.g. by some JetBrains IDEs on Windows) by [@​h1whelan] in #640
• set_key now escapes backslashes, so values containing them (Windows paths, regular expressions) survive a write/read round-trip. Quoted values ending in an escaped backslash are no longer mis-parsed as an escaped quote, which used to swallow the following lines by [@​dchaudhari7177] in #680
• dotenv run now prints a friendly error instead of a traceback when no command is given by [@​bbc2] in #606
• Cache the parsed result for empty .env files so repeated dotenv_values/load_dotenv calls no longer re-read the file by [@​ReinerBRO] in #638

Changelog

Sourced from python-dotenv's changelog.

[1.2.3] - 2026-08-16

Fixed

• Strip a leading UTF-8 BOM from .env file contents so the first variable is no longer silently lost when the file is saved with BOM (e.g. by some JetBrains IDEs on Windows) by [@​h1whelan] in #640
• set_key now escapes backslashes, so values containing them (Windows paths, regular expressions) survive a write/read round-trip. Quoted values ending in an escaped backslash are no longer mis-parsed as an escaped quote, which used to swallow the following lines by [@​dchaudhari7177] in #680
• dotenv run now prints a friendly error instead of a traceback when no command is given by [@​bbc2] in #606
• Cache the parsed result for empty .env files so repeated dotenv_values/load_dotenv calls no longer re-read the file by [@​ReinerBRO] in #638

[1.2.2] - 2026-03-01

Added

• Support for Python 3.14, including the free-threaded (3.14t) build. (#588)

Changed

• The dotenv run command now forwards flags directly to the specified command by [@​bbc2] in #607
• Improved documentation clarity regarding override behavior and the reference page.
• Updated PyPy support to version 3.11.
• Documentation for FIFO file support.
• Dropped Support for Python 3.9.

Fixed

• Improved set_key and unset_key behavior when interacting with symlinks by [@​bbc2] in [790c5c0]
• Corrected the license specifier and added missing Python 3.14 classifiers in package metadata by [@​JYOuyang] in #590

Breaking Changes

• dotenv.set_key and dotenv.unset_key used to follow symlinks in some situations. This is no longer the case. For that behavior to be restored in all cases, follow_symlinks=True should be used.

• In the CLI, set and unset used to follow symlinks in some situations. This is no longer the case.

• dotenv.set_key, dotenv.unset_key and the CLI commands set and unset used to reset the file mode of the modified .env file to 0o600 in some situations. This is no longer the case: The original mode of the file is now preserved. Is the file needed to be created or wasn't a regular file, mode 0o600 is used.

[1.2.1] - 2025-10-26

• Move more config to pyproject.toml, removed setup.cfg
• Add support for reading .env from FIFOs (Unix) by [@​sidharth-sudhir] in #586

[1.2.0] - 2025-10-26

... (truncated)

Commits

• 49515af Bump version: 1.2.2 → 1.2.3
• 8ac846f chore: add release runbook (RELEASING.md) and make release target
• bb31c94 docs: add 1.2.3 release notes (#606, #638, #680)
• f7b18d9 fix: round-trip backslashes through set_key (#680)
• 751f8c1 ci(deps): bump actions/checkout from 6.0.2 to 6.0.3 in the github-actions gro...
• f1937b6 chore(deps): update mkdocs-include-markdown-plugin requirement from >=6.0.0 t...
• 45b9372 chore(deps): update pytest requirement from >=3.9 to >=9.0.3 (#653)
• 72896e9 docs: fix broken mkdocs link in CONTRIBUTING.md (#636)
• 72754a1 ci(deps): bump peaceiris/actions-gh-pages from 4.0.0 to 4.1.0 in the github-a...
• 078325e ci(security): harden CI/CD supply chain with SHA pinning and least-privilege ...
• Additional commits viewable in compare view

Updates duckdb to 1.5.5

Release notes

Sourced from duckdb's releases.

v1.5.5 Bugfix Release

See DuckDB's changelog for all changes in DuckDB.

What's Changed in DuckDB-Python

• Fix numpy deprecations by @​evertlammerts in duckdb/duckdb-python#505
• Fix alias of DuckDBPyRelation.query (closes #468) by @​evertlammerts in duckdb/duckdb-python#524

Commits

• b236c81 Pin submodule to release hash
• e6a21c5 [duckdb-labs bot] Bump DuckDB submodule (#554)
• f637bf4 Bump submodule
• 4c5c73c [duckdb-labs bot] Bump DuckDB submodule (#551)
• 6fae280 Bump submodule
• d8d5f0a [duckdb-labs bot] Bump DuckDB submodule (#548)
• 5d85f06 Bump submodule
• c3cbf8d [duckdb-labs bot] Bump DuckDB submodule (#545)
• 93418b6 Bump submodule
• 24f1915 [duckdb-labs bot] Bump DuckDB submodule (#539)
• Additional commits viewable in compare view

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