Roberson Lab

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1. drop_it_like_its_hot_r drop_it_like_its_hot_r Public

   Compilation of R heatmap functions.

   HTML 14 3

2. motif_scraper motif_scraper Public

   Tool for finding matches to degenerate sequence motifs in FASTA files.

   Python 13 5

3. snpduo snpduo Public

   Repository for the snpduo command-line tool. The tool is designed to calculate identity-by-state in large SNP genotyping datasets. Originally developed in the lab of Dr. Jonathan Pevsner at the Ken…

   C++ 5 2

4. vcf2snpduo vcf2snpduo Public

   Simple python script for converting a valid, multi-sample VCF file into a SNPduo compatible format.

   Python 3

5. ngg2 ngg2 Public

   Python package to identify NGGNGG Cas9 gRNA sites in any indexed FASTA file.

   Python 3 1

6. snpduoweb snpduoweb Public

   Repository for the web-based version / visualization engine for the SNPduoWeb tool. Designed to visualize identity-by-state in high-density snp data. Originally developed in the lab of Dr. Jonathan…

   Perl 1