Figure one - #1

Draft

hossam26644 wants to merge 22 commits into

LohseLab:mainfrom

hossam26644:figure-one

Commits on May 16, 2025

bars
hossam26644
committed
3597457

Commits on May 20, 2025

Commits on Jan 19, 2026

modifications before first arxive draft
hossam26644
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9cbe076
side labels
hossam26644
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372e65c
plot speed n=4
hossam26644
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b85a221
stacked bars rho ratio and remove no of segments
hossam26644
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9449ff3

Commits on Feb 3, 2026

Update speed.py: adjust sequence length, sample sizes, and chromosome labels
hossam26644
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8d0c758

Commits on Feb 13, 2026

unary nodes average hulls update to msprime 1.4
hossam26644
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ae1e6c9
unnecessary files deleted
hossam26644
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b440b5f
Number of Ancestors after n generations
hossam26644
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938d4c8
unused plots removed
hossam26644
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1cfc52f
correct SMC text
hossam26644
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59577cd
update to msprime 1.4
hossam26644
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8357fc4

Commits on Feb 26, 2026

speed plot tweeks
hossam26644
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b8da90b
fix bug with drawing matched span
hossam26644
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956796f

Commits on Mar 8, 2026

l/2 instead of 500kb
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3f572c3

Commits on May 6, 2026

append data
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40400d5
Add function to plot scaling with sample size
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6c153b2
update figure style
hossam26644
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c5f1a5f