Labor Berlin - Charité Vivantes GmbH
Clinical Plattform "Bioinformatics & Data Science"
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- score-assemblies Public
Snakemake workflow for scoring and comparing multiple bacterial genome assemblies (Illumina, Nanopore) to reference genome(s).
LaborBerlin/score-assemblies’s past year of commit activity - ont-assembly-snake Public
Snakemake workflow for bacterial genome assembly + polishing for Oxford Nanopore (ONT) sequencing using multiple tools.
LaborBerlin/ont-assembly-snake’s past year of commit activity - varvis-download Public
A CLI tool to download genomic analysis files from the Varvis API. Supports authentication, file type selection, proxy settings, and destination directory specification.
LaborBerlin/varvis-download’s past year of commit activity - TBProfiler Public Forked from jodyphelan/TBProfiler
Profiling tool for Mycobacterium tuberculosis to detect ressistance and strain type from WGS data
LaborBerlin/TBProfiler’s past year of commit activity - action-gh-release Public Forked from softprops/action-gh-release
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GitHub Action for creating GitHub Releases
LaborBerlin/action-gh-release’s past year of commit activity - MultiQC Public Forked from MultiQC/MultiQC
Aggregate results from bioinformatics analyses across many samples into a single report.
LaborBerlin/MultiQC’s past year of commit activity
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