DifferentiationInterface-v0.7.17

DifferentiationInterface DifferentiationInterface-v0.7.17

Diff since DifferentiationInterface-v0.7.16

Merged pull requests:

• chore(deps): bump the all-julia-packages group across 1 directory with 3 updates (#964) (@dependabot[bot])
• test: activate Enzyme tests on Julia 1.12 (#966) (@gdalle)
• docs: fix Hessian docstrings (#968) (@adrhill)
• fix: minor improvements to error messages (#969) (@adrhill)
• chore: update citation to JMLR paper and recommend sparse AD citations (#973) (@gdalle)
• fix: make wrong-mode pushforward/pullback return the correct array type (#974) (@gdalle)
• chore: improve README badges (#976) (@gdalle)
• chore(deps): bump julia-actions/cache from 1 to 3 (#978) (@dependabot[bot])
• chore: update SMC links to JuliaDiff repo (#979) (@gdalle)
• test: shorten Mooncake test suite (#980) (@gdalle)
• chore(deps): bump codecov/codecov-action from 5 to 6 (#982) (@dependabot[bot])
• doc: add docstrings to the result anlysis methods for sparse matrix preparations (#984) (@franckgaga)
• test: shorten Mooncake test suite (#985) (@gdalle)
• chore(deps): bump julia-actions/setup-julia from 2 to 3 (#994) (@dependabot[bot])
• chore: upper-bound Mooncake version (coherence with General) (#995) (@gdalle)
• fix: make DI compatible with latest Mooncake friendly tangents (#1001) (@gdalle)
• chore: clean up backend testing CI (#1002) (@gdalle)

Closed issues:

• Enzyme is not tested on 1.12 (#965)
• Using ncolors(::SparseJacobianPrep) / ncolors(::SparseHessianPrep) publicly ? (#981)
• Changes in Mooncake 0.5.25 that may affect DI users (#986)
• Drop DI’s friendly-tangent support for Mooncake and remove DI’s upper bound on Mooncake (#996)
• Drop Mooncake from DI support? (#999)
• Didn't want issue 1000 to be about Mooncake (#1000)

DifferentiationInterface-v0.7.16

DifferentiationInterface DifferentiationInterface-v0.7.16

Diff since DifferentiationInterface-v0.7.15

Merged pull requests:

• fix!: turn Chairmarks and JET into weakdeps (#958) (@gdalle)
• fix: upgrade Mooncake compat to v0.5 (#961) (@gdalle)

Closed issues:

• Mooncake Backend doesn't handle functions with StaticArrays output (#642)

DifferentiationInterfaceTest-v0.11.0

DifferentiationInterfaceTest DifferentiationInterfaceTest-v0.11.0

Diff since DifferentiationInterfaceTest-v0.10.4

Breaking changes

Removed JET, Chairmarks and DataFrames dependencies:

• To analyze type stability, run using JET first
• To benchmark, run using Chairmarks first and manually convert the resulting table into a DataFrame if necessary

Merged pull requests:

• Minor tweaks to "Mathematical model" docs (#922) (@adrhill)
• docs: clarify multithreading limitations (#923) (@gdalle)
• chore: replace CompatHelper with dependabot (#924) (@gdalle)
• chore: revamp testing CI with dedicated environments (#926) (@gdalle)
• perf: improve wrong-mode pushforward/pullback for scalars (#931) (@gdalle)
• fix: improve wrong-mode pushforward/pullback (#932) (@gdalle)
• chore: ignore Diffractor in dependabot (#933) (@gdalle)
• chore(deps): bump actions/checkout from 5 to 6 (#934) (@dependabot[bot])
• test: toggle fail fast (#936) (@gdalle)
• fix: function shadows for higher-order Enzyme (#943) (@gdalle)
• feat: allow non-numeric arguments with AutoSymbolics (#945) (@AayushSabharwal)
• chore: bump DI to v0.7.13 (#946) (@gdalle)
• Fix inner preparation behavior for Mooncake (#948) (@yebai)
• chore: bump DI + changelog (#952) (@gdalle)
• fix: overloaded_input_type for one-element vector input (#954) (@ErikQQY)
• test: bypass failing Enzyme test until upstream fix (#955) (@gdalle)
• chore: bump DI to v0.7.15 (#956) (@gdalle)
• fix!: turn Chairmarks and JET into weakdeps (#958) (@gdalle)

Closed issues:

• Overhead of function call to get output shape in pushforward-via-pullback (#930)
• Fix second order with FunctionContext in Enzyme (#937)
• This is not an issue (#941)
• Missing _shadow method in Enzyme extension (#942)
• Missing basis method (#944)
• Precompilation error with weakdeps (#947)
• inner second order and outer optimization AD? (#953)

DifferentiationInterface-v0.7.15

DifferentiationInterface DifferentiationInterface-v0.7.15

Diff since DifferentiationInterface-v0.7.14

Merged pull requests:

• fix: overloaded_input_type for one-element vector input (#954) (@ErikQQY)
• test: bypass failing Enzyme test until upstream fix (#955) (@gdalle)
• chore: bump DI to v0.7.15 (#956) (@gdalle)

Closed issues:

• inner second order and outer optimization AD? (#953)

DifferentiationInterface-v0.7.14

DifferentiationInterface DifferentiationInterface-v0.7.14

Diff since DifferentiationInterface-v0.7.13

Merged pull requests:

• Fix inner preparation behavior for Mooncake (#948) (@yebai)
• chore: bump DI + changelog (#952) (@gdalle)

Closed issues:

• Precompilation error with weakdeps (#947)

DifferentiationInterface-v0.7.13

DifferentiationInterface DifferentiationInterface-v0.7.13

Diff since DifferentiationInterface-v0.7.12

Merged pull requests:

• Minor tweaks to "Mathematical model" docs (#922) (@adrhill)
• docs: clarify multithreading limitations (#923) (@gdalle)
• chore: replace CompatHelper with dependabot (#924) (@gdalle)
• chore: revamp testing CI with dedicated environments (#926) (@gdalle)
• perf: improve wrong-mode pushforward/pullback for scalars (#931) (@gdalle)
• fix: improve wrong-mode pushforward/pullback (#932) (@gdalle)
• chore: ignore Diffractor in dependabot (#933) (@gdalle)
• chore(deps): bump actions/checkout from 5 to 6 (#934) (@dependabot[bot])
• test: toggle fail fast (#936) (@gdalle)
• fix: function shadows for higher-order Enzyme (#943) (@gdalle)
• feat: allow non-numeric arguments with AutoSymbolics (#945) (@AayushSabharwal)
• chore: bump DI to v0.7.13 (#946) (@gdalle)

Closed issues:

• Overhead of function call to get output shape in pushforward-via-pullback (#930)
• Fix second order with FunctionContext in Enzyme (#937)
• This is not an issue (#941)
• Missing _shadow method in Enzyme extension (#942)
• Missing basis method (#944)

DifferentiationInterfaceTest-v0.10.4

DifferentiationInterfaceTest DifferentiationInterfaceTest-v0.10.4

Diff since DifferentiationInterfaceTest-v0.10.3

Merged pull requests:

• CompatHelper: bump compat for Symbolics in [weakdeps] to 7 for package DifferentiationInterface, (keep existing compat) (#909) (@github-actions[bot])
• chore: test Mooncake on Julia 1.12 (#913) (@gdalle)
• test: remove neural network tests, clean up envs (#914) (@gdalle)
• fix: speed up Mooncake in forward mode by preallocating tangents (#915) (@gdalle)
• fix: speed up Mooncake reverse mode with selective zeroing (#916) (@gdalle)
• docs: better documentation on argument assumptions (#917) (@gdalle)

Closed issues:

• Testing NNlib / Lux / Flux (#105)
• Support ADOLC.jl (#290)
• Tape-able pullback with ReverseDiff (#321)
• Mixed-mode Jacobian failed when Tracker as the reverse mode backend (#694)
• Backend switching for ReverseDiff.jl (#803)
• New autodiff rule from DifferentiateWith (#804)
• Enhancing DifferentiateWith Interface (#806)
• Pre-allocate Cache and other contexts for Mooncake (#833)
• slow forward differentiation with Mooncake (#854)
• Be more explicit about assumptions (#861)
• Stress that preparation should rather happen on typical than random inputs for sparse stuff (#905)

DifferentiationInterface-v0.7.12

DifferentiationInterface DifferentiationInterface-v0.7.12

Diff since DifferentiationInterface-v0.7.11

Merged pull requests:

• CompatHelper: bump compat for Symbolics in [weakdeps] to 7 for package DifferentiationInterface, (keep existing compat) (#909) (@github-actions[bot])
• chore: test Mooncake on Julia 1.12 (#913) (@gdalle)
• test: remove neural network tests, clean up envs (#914) (@gdalle)
• fix: speed up Mooncake in forward mode by preallocating tangents (#915) (@gdalle)
• fix: speed up Mooncake reverse mode with selective zeroing (#916) (@gdalle)
• docs: better documentation on argument assumptions (#917) (@gdalle)

Closed issues:

• Testing NNlib / Lux / Flux (#105)
• Support ADOLC.jl (#290)
• Tape-able pullback with ReverseDiff (#321)
• Mixed-mode Jacobian failed when Tracker as the reverse mode backend (#694)
• Backend switching for ReverseDiff.jl (#803)
• New autodiff rule from DifferentiateWith (#804)
• Enhancing DifferentiateWith Interface (#806)
• Pre-allocate Cache and other contexts for Mooncake (#833)
• slow forward differentiation with Mooncake (#854)
• Be more explicit about assumptions (#861)
• Stress that preparation should rather happen on typical than random inputs for sparse stuff (#905)

DifferentiationInterfaceTest-v0.10.3

DifferentiationInterfaceTest DifferentiationInterfaceTest-v0.10.3

Diff since DifferentiationInterfaceTest-v0.10.2

Merged pull requests:

• chore: test on Julia 1.12 with JET 0.10 (#841) (@gdalle)
• Support ADTypes.NoAutoDiff (#851) (@oschulz)
• fix: remove Enzyme error hint for runtime activity (#852) (@gdalle)
• fix: speed up Mooncake by avoiding tuple broadcasting (#853) (@gdalle)
• test: untoggle newly-passing Enzyme tests (#856) (@gdalle)
• chore: fix language versions in CI (#863) (@gdalle)
• fix: handle empty row or column colors in mixed mode sparse Jacobian (#864) (@gdalle)
• chore: bump DI to 0.7.9 (#867) (@gdalle)
• chore: switch to Runic formatting from JuliaFormatter (#871) (@gdalle)
• fix: add Prep supertype to the public interface (#875) (@gdalle)
• fix: improve performance of unbatched out-of-place Jacobian (#876) (@gdalle)
• chore: update JET & JLArrays compat (#877) (@gdalle)
• chore: bump DI to v0.7.10 (#878) (@gdalle)
• fix: allow (empty) sparse Hessians of linear functions (#906) (@gdalle)
• docs: improve tutorial (#907) (@gdalle)
• chore: add test and doc compat bounds (#911) (@gdalle)
• chore: bump DI and DIT (#912) (@gdalle)

Closed issues:

• Sparse Jacobian preparation with mixed mode AD and GreedyColoringAlgorithm(; postprocessing=true) fails (#857)
• Switch to Runic? (#868)
• Use FunctionWrappers to avoid function specialization in test scenarios (#869)
• Make Prep Public API (#873)
• Avoid two-layer Jacobian concatenation for non-batchable backends (#874)

DifferentiationInterface-v0.7.11

DifferentiationInterface DifferentiationInterface-v0.7.11

Diff since DifferentiationInterface-v0.7.10

Merged pull requests:

• fix: allow (empty) sparse Hessians of linear functions (#906) (@gdalle)
• docs: improve tutorial (#907) (@gdalle)
• chore: add test and doc compat bounds (#911) (@gdalle)
• chore: bump DI and DIT (#912) (@gdalle)