add: search multi omics - #140

Merged

ChenZiHong-Gavin merged 25 commits into

InternScience:mainfrom

CHERRY-ui8:search-multi-omics

Dec 25, 2025

Commits on Dec 24, 2025

refactor: reconstruct examples/search file
CHERRY-ui8
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628b8bd
feat: enhance BaseSearcher
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4068b95
Merge remote-tracking branch 'origin/main' into search-multi-omics
CHERRY-ui8
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098d7da
feat: enhance searchers with multi-threading and improved error handling
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8eb45a9
add: add searched example input files for DNA, protein, and RNA
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03067df
refactor: replace search_all with SearchService
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1c534e4
fix: update search operator init to use SearchService
CHERRY-ui8
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bf74484
fix: upgrade run_concurrent to be compactible with SearchService
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2764acb
fix: add undefined functions in DNA db building script
CHERRY-ui8
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9591a23
perf: perf search_service
ChenZiHong-Gavin
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f231f2a
wip: add pipeline annotations
ChenZiHong-Gavin
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b95b168

Commits on Dec 25, 2025