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Update README with running instructions for Robin #13

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ghareea merged 3 commits into from
Apr 21, 2026
Merged

Update README with running instructions for Robin #13

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f91e6fb
Update README with running instructions for Robin
ghareea Apr 21, 2026
6a9d164
Update README for clarity on disease input
ghareea Apr 21, 2026
ac2a865
running precommit to fix
SamWright822 Apr 21, 2026
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2 changes: 2 additions & 0 deletions README.md
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Expand Up @@ -87,6 +87,8 @@ For a fully self-contained environment that avoids OS-level dependency conflicts

## Running Robin via `robin_demo.ipynb`

_In order to run Robin as used in the manuscript, only input the name of a disease, with no other text. If you wish to optimize how Robin searches for experimental models and therapeutic candidates, we suggest changing the internal prompts of Robin (via prompts.py), not the initial input to the pipeline._

1. **Launch Jupyter Notebook or JupyterLab:**
Navigate to the `robin` directory in your terminal (ensure your virtual environment is activated) and run:

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