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update molecular formula pattern to include dashes in the formula e.g… #37

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Merged
jkalayan merged 1 commit into from
Sep 15, 2026
Merged

update molecular formula pattern to include dashes in the formula e.g… #37

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3 changes: 2 additions & 1 deletion biosim_schema/schema/components/biosim_composition.yaml
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Original file line number Diff line number Diff line change
Expand Up @@ -371,10 +371,11 @@ slots:
molecular_formula:
description:
The molecular formula of a molecule\
pattern: "^([A-Z][a-z]?\\d*)+([+-]|\\d+[+-])?$"
pattern: "^([A-Z][a-z]?\\d*)+([+-]\\d*|\\d+[+-])?$"
examples:
- value: "C8H10N4O2"
- value: "C10H16N+"
- value: "C40H46N20O18P3-3"
range: string
annotations:
engine_mapping:
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2 changes: 1 addition & 1 deletion project/linkml/jsonschema/biosim_schema.schema.json
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Expand Up @@ -1344,7 +1344,7 @@
},
"molecular_formula": {
"description": "The molecular formula of a molecule\\",
"pattern": "^([A-Z][a-z]?\\d*)+([+-]|\\d+[+-])?$",
"pattern": "^([A-Z][a-z]?\\d*)+([+-]\\d*|\\d+[+-])?$",
"type": [
"string",
"null"
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