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.github/PULL_REQUEST_TEMPLATE Expand file tree Collapse file tree Original file line number Diff line number Diff line change 1+ # Checklist
2+ - [ ] Information about the model is in the SBML metadata
3+ - [ ] Reference to the original publication, and any other relevant references
4+ - [ ] A brief model description (one or two sentences)
5+ - [ ] A brief description of the data (one or two sentences)
6+ - [ ] Any differences between the implementation and the original publication
7+ - [ ] Information is in the model's GitHub issue
8+ - [ ] Any differences between the implementation and the original publication
9+ - [ ] Experience of fitting / uncertainty analysis (e.g. optimizer used, hyperparameters, reproducibility of best fit)
10+ - [ ] Source of nominal parameters (e.g.: taken from the original publication, or from your own fitting)
11+ - [ ] PEtab files
12+ - [ ] A "simulated data" measurement table is included, using the nominal parameters
13+ - [ ] A visualization table is included, that can be used with the simulate data to reproduce figures from the original publication
14+ - [ ] I am assigned to the GitHub issue
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