Widen omop-alchemy, oa-configurator, and omop-emb pins to semver ranges, add min-version CI and Dependabot

.github/dependabot.yml

@@ -0,0 +1,13 @@
+version: 2
+updates:
+  - package-ecosystem: "uv"
+    directory: "/"
+    schedule:
+      interval: "weekly"
+    versioning-strategy: "lockfile-only"
+    labels:
+      - "dependencies"
+    allow:
+      - dependency-name: "omop-alchemy"
+      - dependency-name: "oa-configurator"
+      - dependency-name: "omop-emb"

.github/workflows/ci.yml

@@ -17,3 +17,15 @@ jobs:
         uv run omop-config configure omop_graph \
           --max-depth 6 \
           --max-paths 20
+  build-test-lowest-direct:
+    uses: AustralianCancerDataNetwork/cava-devops/.github/workflows/build-test.yml@main
+    with:
+      resolution: lowest-direct
+      setup-commands: |
+        uv run omop-config configure omop_alchemy \
+          --dialect sqlite \
+          --database-name test.db \
+          --cdm-schema main
+        uv run omop-config configure omop_graph \
+          --max-depth 6 \
+          --max-paths 20

pyproject.toml

@@ -33,26 +33,26 @@ classifiers = [
 ]
 
 dependencies = [
-  "omop-alchemy==0.8.0",
+  "omop-alchemy>=0.8.0,<1.0.0",
   "typing-extensions>=4.15.0",
   "typer>=0.12",
   "rich>=13.0",
   "oaklib",
-  "oa-configurator==0.1.2"
+  "oa-configurator>=0.1.2,<1.0.0"
 ]
 
 [project.optional-dependencies]
 emb = [
-  "omop-emb==1.1.1",
+  "omop-emb>=1.1.1,<2.0.0",
 ]
 faiss-cpu = [
-  "omop-emb[faiss-cpu]==1.1.1",
+  "omop-emb[faiss-cpu]>=1.1.1,<2.0.0",
 ]
 pgvector = [
-  "omop-emb[pgvector]==1.1.1",
+  "omop-emb[pgvector]>=1.1.1,<2.0.0",
 ]
 postgres = [
-  "omop-alchemy[postgres]",
+  "omop-alchemy[postgres]>=0.8.0,<1.0.0",
 ]
 
 
@@ -70,7 +70,7 @@ dev = [
     "mkdocs-mermaid2-plugin",
     "mkdocs-table-reader-plugin",
     "mkdocs-macros-plugin",
-    "oa-configurator[postgres]>=0.1.1",
+    "oa-configurator[postgres]>=0.1.2,<1.0.0",
 ]
 
 [project.scripts]