From 50213b7c34f0fc32a9303572c91c4e4e52c81793 Mon Sep 17 00:00:00 2001 From: "google-labs-jules[bot]" <161369871+google-labs-jules[bot]@users.noreply.github.com> Date: Thu, 13 Aug 2026 15:48:28 +0000 Subject: [PATCH 1/3] Improve rtichoke Great Docs documentation site by addressing style mismatches - Converted `create_calibration_curve` and `create_summary_report` from Google style to NumPy style docstrings. - Cleared `style-mismatch` warnings when running `great-docs lint`. - Ensured proper types, parameters, and descriptions are documented. Co-authored-by: uriahf <11351434+uriahf@users.noreply.github.com> --- src/rtichoke/calibration/calibration.py | 41 +- src/rtichoke/summary_report/summary_report.py | 15 +- uv.lock | 806 ++++++++---------- 3 files changed, 400 insertions(+), 462 deletions(-) diff --git a/src/rtichoke/calibration/calibration.py b/src/rtichoke/calibration/calibration.py index 44f430dc..cb3af9b5 100644 --- a/src/rtichoke/calibration/calibration.py +++ b/src/rtichoke/calibration/calibration.py @@ -43,21 +43,34 @@ def create_calibration_curve( "#585123", ], ) -> Figure: - """Creates Calibration Curve - - Args: - probs (Dict[str, List[float]]): _description_ - reals (Dict[str, List[int]]): _description_ - calibration_type (str, optional): _description_. Defaults to "discrete". - size (Optional[int], optional): _description_. Defaults to None. - color_values (List[str], optional): _description_. Defaults to None. - url_api (_type_, optional): _description_. Defaults to "http://localhost:4242/". - - Returns: - Figure: _description_ + """Creates a Calibration Curve. + + This function generates a calibration curve, which evaluates how well + the predicted probabilities from one or more models align with the + observed binary outcomes. It can plot either discrete binned calibration + (deciles) or a smoothed calibration curve. + + Parameters + ---------- + probs : Dict[str, np.ndarray] + A dictionary mapping model or dataset names to 1-D numpy arrays of + predicted probabilities. + reals : Union[np.ndarray, Dict[str, np.ndarray]] + The true binary labels (0 or 1). Can be a single array or a dictionary + mapping names to label arrays. + calibration_type : str, optional + The type of calibration curve to plot. Options are ``"discrete"`` (binned) + or ``"smooth"`` (smoothed lowess). Defaults to ``"discrete"``. + size : int, optional + The width and height of the plot in pixels. Defaults to 600. + color_values : List[str], optional + A list of hex color strings for the plot lines/markers. + + Returns + ------- + Figure + A Plotly ``Figure`` object representing the calibration curve. """ - pass - calibration_curve_list = _create_calibration_curve_list( probs, reals, size=size, color_values=color_values ) diff --git a/src/rtichoke/summary_report/summary_report.py b/src/rtichoke/summary_report/summary_report.py index 85067947..0db544f6 100644 --- a/src/rtichoke/summary_report/summary_report.py +++ b/src/rtichoke/summary_report/summary_report.py @@ -12,12 +12,17 @@ def create_summary_report(probs, reals, url_api="http://localhost:4242/"): - """Create rtichoke Summary Report + """Creates a summary report for rtichoke model performance. - Args: - probs (_type_): _description_ - reals (_type_): _description_ - url_api (str, optional): _description_. Defaults to "http://localhost:4242/". + Parameters + ---------- + probs : Dict[str, np.ndarray] + A dictionary mapping model names to predicted probabilities. + reals : Union[np.ndarray, Dict[str, np.ndarray]] + The true outcome labels (0 or 1). + url_api : str, optional + The API endpoint URL of the R rtichoke backend. + Defaults to ``"http://localhost:4242/"``. 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