diff --git a/CMakeLists.txt b/CMakeLists.txt index 3d9e70f7..2f4cac6b 100644 --- a/CMakeLists.txt +++ b/CMakeLists.txt @@ -154,7 +154,7 @@ endif() # Link our native node module against cmake-js, a few Windows-specific libraries, and libOpenCOR. if(WIN32) - set(WINDOWS_LIBS crypt32 version wldap32 ws2_32) + set(WINDOWS_LIBS bcrypt crypt32 iphlpapi version wldap32 ws2_32) endif() target_link_libraries(${CMAKE_PROJECT_NAME} PRIVATE diff --git a/bun.lock b/bun.lock index c958c663..7b26ac91 100644 --- a/bun.lock +++ b/bun.lock @@ -40,11 +40,11 @@ "stylelint-config-standard": "^40.0.0", "tailwindcss": "^4.3.0", "tailwindcss-primeui": "^0.6.1", - "tar": "^7.5.15", + "tar": "^7.5.16", "typescript": "^6.0.3", "unplugin-vue-components": "^32.1.0", "vite": "^7.3.2", - "vue-tsc": "^3.3.2", + "vue-tsc": "^3.3.3", }, "peerDependencies": { "vue": "3.4.21", @@ -118,7 +118,7 @@ "@csstools/css-parser-algorithms": ["@csstools/css-parser-algorithms@4.0.0", "", { "peerDependencies": { "@csstools/css-tokenizer": "^4.0.0" } }, "sha512-+B87qS7fIG3L5h3qwJ/IFbjoVoOe/bpOdh9hAjXbvx0o8ImEmUsGXN0inFOnk2ChCFgqkkGFQ+TpM5rbhkKe4w=="], - 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"version": "0.20260529.0", - "libopencorVersion": "0.20260529.0", + "version": "0.20260604.0", + "libopencorVersion": "0.20260604.0", "scripts": { "build": "vite build && bun scripts/generate.version.js", "build:lib": "vite build --config vite.lib.config.ts && bunx --bun vue-tsc --project tsconfig.lib.types.json", @@ -94,6 +94,6 @@ "typescript": "^6.0.3", "unplugin-vue-components": "^32.1.0", "vite": "^7.3.2", - "vue-tsc": "^3.3.2" + "vue-tsc": "^3.3.3" } } diff --git a/src/renderer/src/components/dialogs/SimulationExperimentViewSettingsDialog.vue b/src/renderer/src/components/dialogs/SimulationExperimentViewSettingsDialog.vue index 0cb03f5d..0eb84b9c 100644 --- a/src/renderer/src/components/dialogs/SimulationExperimentViewSettingsDialog.vue +++ b/src/renderer/src/components/dialogs/SimulationExperimentViewSettingsDialog.vue @@ -30,13 +30,25 @@

Simulation

-

Configure the starting and ending points of the simulation, as well as its point interval.

+

Configure the initial, starting, and ending points of the simulation, as well as its point interval.

+
+ +
+
+ + Data points between the initial and starting points will not be tracked. +
+
+
(() => { const res: locApi.IIssue[] = []; + if (localSettings.value.simulation.initialPoint == null) { + res.push({ + type: EIssueType.WARNING, + description: 'The initial point must be specified.' + }); + } + if (localSettings.value.simulation.startingPoint == null) { res.push({ type: EIssueType.WARNING, @@ -1056,6 +1076,17 @@ const simulationSettingsIssues = vue.computed(() => { }); } + if ( + localSettings.value.simulation.initialPoint !== null && + localSettings.value.simulation.startingPoint !== null && + localSettings.value.simulation.startingPoint < localSettings.value.simulation.initialPoint + ) { + res.push({ + type: EIssueType.WARNING, + description: 'The starting point must be greater or equal to the initial point.' + }); + } + if ( localSettings.value.simulation.startingPoint !== null && localSettings.value.simulation.endingPoint !== null && @@ -1500,6 +1531,7 @@ const onOk = () => { emit('ok', { simulation: { + initialPoint: localSettings.value.simulation.initialPoint, startingPoint: localSettings.value.simulation.startingPoint, endingPoint: localSettings.value.simulation.endingPoint, pointInterval: localSettings.value.simulation.pointInterval diff --git a/src/renderer/src/components/views/SimulationExperimentView.vue b/src/renderer/src/components/views/SimulationExperimentView.vue index 4f84aee6..ac677d25 100644 --- a/src/renderer/src/components/views/SimulationExperimentView.vue +++ b/src/renderer/src/components/views/SimulationExperimentView.vue @@ -76,6 +76,10 @@ @change="updatePlot()" /> +
+ The simulation was run for
+ {{ preSimulationDuration }} {{ interactiveInstanceTask ? interactiveInstanceTask.voiUnit() : '' }} prior to plotting. +
@@ -208,6 +212,10 @@
+
+ The simulation was run for
+ {{ preSimulationDuration }} {{ interactiveInstanceTask ? interactiveInstanceTask.voiUnit() : '' }} prior to plotting. +
@@ -674,6 +682,7 @@ const interactiveSettings = vue.computed(() = return { simulation: { + initialPoint: interactiveUniformTimeCourse.initialTime(), startingPoint: interactiveUniformTimeCourse.outputStartTime(), endingPoint: interactiveUniformTimeCourse.outputEndTime(), pointInterval: @@ -691,6 +700,12 @@ const interactiveSettings = vue.computed(() = } }; }); +const preSimulationDuration = vue.computed(() => { + const settings = interactiveSettings.value; + + return settings.simulation.startingPoint - settings.simulation.initialPoint; +}); + const interactiveOldSettings = vue.ref(JSON.stringify(vue.toRaw(interactiveSettings.value))); // A helper function to generate a unique external data ID based on a candidate name and a set of already used IDs, by @@ -1845,7 +1860,7 @@ const onInteractiveSettingsOk = (settings: ISimulationExperimentViewSettings): v const oldCvodeMaximumStep = interactiveCvode.maximumStep(); - interactiveUniformTimeCourse.setInitialTime(settings.simulation.startingPoint); + interactiveUniformTimeCourse.setInitialTime(settings.simulation.initialPoint); interactiveUniformTimeCourse.setOutputStartTime(settings.simulation.startingPoint); interactiveUniformTimeCourse.setOutputEndTime(settings.simulation.endingPoint); interactiveUniformTimeCourse.setNumberOfSteps( @@ -1983,6 +1998,21 @@ if (common.isDesktop()) { font-size: 1.25rem; } +.note { + color: var(--p-text-muted-color); + margin-top: 0.5rem; + border: 1px dashed var(--p-content-border-color); + padding: 0 0.5rem 0.5rem 0.5rem !important; + text-align: center; + font-size: 0.75rem; +} + +.note :deep(.p-fieldset-legend) { + font-size: 0.875rem; + padding-top: 0; + padding-bottom: 0; +} + :deep(.p-button-icon) { font-size: 1.5rem; } diff --git a/src/renderer/src/components/widgets/InputScientificNumber.vue b/src/renderer/src/components/widgets/InputScientificNumber.vue index 87639785..dd91df11 100644 --- a/src/renderer/src/components/widgets/InputScientificNumber.vue +++ b/src/renderer/src/components/widgets/InputScientificNumber.vue @@ -7,7 +7,7 @@ :aria-valuenow="currentNumericValue ?? undefined" :aria-valuemin="props.min ?? undefined" :aria-valuemax="props.max ?? undefined" - v-keyfilter="{ pattern: /^[+-]?(\d*(\.\d*)?|\.\d*)([eE][+-]?\d*)?$/, validateOnly: true }" + v-keyfilter="{ pattern: /^[+-]?(\d*(\.\d*)?|\.\d*)([eE][+-]?\d*)?$/ }" @update:model-value="onUpdateModelValue" @focus="onFocus" @blur="onBlur" @@ -149,7 +149,7 @@ const currentNumericValue = vue.computed(() => { const inferredNumericValue = vue.computed(() => { const source = internalValue.value === '' ? (props.modelValue ?? props.min ?? 0) : parseFloat(internalValue.value); - return Number.isFinite(source) ? source : (props.modelValue ?? props.min ?? 0); + return Number.isFinite(source) ? source : (props.modelValue ?? 0); }); const activeButton = vue.ref<'increment' | 'decrement' | null>(null); const minBoundary = vue.computed(() => { @@ -213,12 +213,17 @@ const onPaste = (event: ClipboardEvent) => { event.preventDefault(); - const pastedValue = clipboardData.getData('text') || ''; + const rawPastedValue = clipboardData.getData('text') || ''; - if (pastedValue === '') { + if (rawPastedValue === '') { return; } + // Normalise Unicode minus signs to ASCII hyphen-minus so that negative numbers copied from text sources using + // typographic minus signs are handled correctly. + + const pastedValue = rawPastedValue.replace(/[\u2212\u2213]/g, '-'); + // Try to extract a valid scientific-number pattern from the pasted text. Failing that, try to sanitise the pasted // text first by removing invalid characters, then extracting a scientific-number pattern from it. // Note: the pattern used in the keyfilter is suitable for validating a scientific number when typing it in, but here @@ -393,9 +398,7 @@ const spin = (direction: 1 | -1): boolean => { const inferredBaseValue = internalValue.value === '' ? (props.modelValue ?? props.min ?? 0) : parseFloat(internalValue.value); - const safeCurrentValue = Number.isFinite(inferredBaseValue) - ? inferredBaseValue - : (props.modelValue ?? props.min ?? 0); + const safeCurrentValue = Number.isFinite(inferredBaseValue) ? inferredBaseValue : (props.modelValue ?? 0); const nextValue = validateValue(addWithPrecision(safeCurrentValue, step * direction)); if (!Number.isFinite(nextValue) || nextValue === safeCurrentValue) {