Skip to content

vcf_to_csv -> gatk4/variantstotable #280

@kubranarci

Description

@kubranarci

Description of feature

I am not sure if this is something possible but worth to try.

Check if https://github.com/nf-core/variantbenchmarking/blob/dev/modules/local/custom/vcf_to_csv/main.nf can be replaced with gatk4/variantstotable (nf-core module)

  • check if all the subworkflows works as expected with the new module.

Metadata

Metadata

Assignees

Type

No type
No fields configured for issues without a type.

Projects

No projects

Milestone

No milestone

Relationships

None yet

Development

No branches or pull requests

Issue actions