ssds/modules.json at dev · nf-core/ssds · GitHub

1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
{
    "name": "nf-core/ssds",
    "homePage": "https://github.com/nf-core/ssds",
    "repos": {
        "nf-core/modules": {
            "bedtools/bamtobed": {
                "git_sha": "9d0cad583b9a71a6509b754fdf589cbfbed08961"
            },
            "bedtools/makewindows": {
                "git_sha": "9d0cad583b9a71a6509b754fdf589cbfbed08961"
            },
            "bedtools/sort": {
                "git_sha": "9d0cad583b9a71a6509b754fdf589cbfbed08961"
            },
            "bwa/index": {
                "git_sha": "20d8250d9f39ddb05dfb437603aaf99b5c0b2b41"
            },
            "bwa/mem": {
                "git_sha": "1765225042d40cf01eb9469ea95bf6d0f6810937"
            },
            "custom/dumpsoftwareversions": {
                "git_sha": "20d8250d9f39ddb05dfb437603aaf99b5c0b2b41"
            },
            "deeptools/plotfingerprint": {
                "git_sha": "9d0cad583b9a71a6509b754fdf589cbfbed08961"
            },
            "fastqc": {
                "git_sha": "9d0cad583b9a71a6509b754fdf589cbfbed08961"
            },
            "multiqc": {
                "git_sha": "20d8250d9f39ddb05dfb437603aaf99b5c0b2b41"
            },
            "picard/collectmultiplemetrics": {
                "git_sha": "9d0cad583b9a71a6509b754fdf589cbfbed08961"
            },
            "picard/markduplicates": {
                "git_sha": "9d0cad583b9a71a6509b754fdf589cbfbed08961"
            },
            "picard/sortsam": {
                "git_sha": "9d0cad583b9a71a6509b754fdf589cbfbed08961"
            },
            "samtools/idxstats": {
                "git_sha": "20d8250d9f39ddb05dfb437603aaf99b5c0b2b41"
            },
            "samtools/index": {
                "git_sha": "0fafaeebf52cc5ab554b83297ed02a48d852a848"
            },
            "samtools/view": {
                "git_sha": "9d0cad583b9a71a6509b754fdf589cbfbed08961"
            },
            "trimgalore": {
                "git_sha": "9d0cad583b9a71a6509b754fdf589cbfbed08961"
            },
            "ucsc/bedgraphtobigwig": {
                "git_sha": "9d0cad583b9a71a6509b754fdf589cbfbed08961"
            }
        }
    }
}