chore(copier): update from template#105
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|
| Descriptor | Linter | Files | Fixed | Errors | Warnings | Elapsed time |
|---|---|---|---|---|---|---|
| ✅ BASH | shellcheck | 2 | 0 | 0 | 0.49s | |
| ✅ BASH | shfmt | 2 | 0 | 0 | 0 | 1.8s |
| jscpd | yes | 464 | no | 9.69s | ||
| ✅ JSON | prettier | 19 | 15 | 0 | 0 | 2.76s |
| ✅ JSON | v8r | 19 | 0 | 0 | 5.38s | |
| ✅ MARKDOWN | rumdl | 28 | 0 | 0 | 0 | 1.81s |
| ruff | yes | yes | 47 | no | 1.18s | |
| ✅ PYTHON | ruff-format | yes | yes | no | no | 0.17s |
| ✅ REPOSITORY | git_diff | yes | no | no | 2.23s | |
| cspell | yes | 15 | no | 7.2s |
Detailed Issues
⚠️ SPELL / cspell - 15 errors
.github/workflows/release-pr.yaml:72:15 - Unknown word (orhun) -- uses: orhun/git-cliff-action@f5
Suggestions: [oahu, oran, ordn, oren, orin]
.github/workflows/release-pr.yaml:80:15 - Unknown word (orhun) -- uses: orhun/git-cliff-action@f5
Suggestions: [oahu, oran, ordn, oren, orin]
exp/2026/05/13/toy/data/30-inverse-activation-diff-forward-no-collision-summary.json:13:4 - Unknown word (bbox) -- "bbox_diagonal": 1.732050
Suggestions: [box, mbox, vbox, xbox, Xbox]
exp/2026/05/13/toy/data/40-inverse-activation-diff-forward-collision-summary.json:17:12 - Unknown word (atol) -- "forward_atol": 0.001,
Suggestions: [atob, atom, aton, atop, awol]
exp/2026/05/13/toy/data/40-inverse-activation-diff-forward-collision-summary.json:19:4 - Unknown word (bbox) -- "bbox_diagonal": 2.872281
Suggestions: [box, mbox, vbox, xbox, Xbox]
exp/2026/05/13/toy/data/41-inverse-active-tet-activation-diff-forward-collision-summary.json:23:12 - Unknown word (atol) -- "forward_atol": 0.001,
Suggestions: [atob, atom, aton, atop, awol]
exp/2026/05/13/toy/data/41-inverse-active-tet-activation-diff-forward-collision-summary.json:29:4 - Unknown word (bbox) -- "bbox_diagonal": 2.872281
Suggestions: [box, mbox, vbox, xbox, Xbox]
exp/2026/05/13/toy/src/20-smas-layer-bottom-force-collision.py:151:22 - Unknown word (Efat) -- mesh.field_data["Efat"] = np.asarray([cfg
Suggestions: [Efta, Feat, Erat, Eat, Eft]
exp/2026/05/13/toy/src/20-smas-layer-bottom-force-collision.py:152:22 - Unknown word (Esmas) -- mesh.field_data["Esmas"] = np.asarray([cfg
Suggestions: [Smas, Seams, Seas, edams, Edams]
exp/2026/05/20/inverse-face/docs/20-inverse-face.md:42:38 - Unknown word (atol) -- tolerance: `rtol=0.0005`, `atol=0`
Suggestions: [atob, atom, aton, atop, awol]
exp/2026/05/20/inverse-face/docs/20-inverse-face.md:43:38 - Unknown word (atol) -- tolerance: `rtol=0.0005`, `atol=0`
Suggestions: [atob, atom, aton, atop, awol]
exp/2026/05/20/inverse-face/docs/30-transfer-activation-3152k.md:75:11 - Unknown word (atol) -- forward_atol: 0.0
Suggestions: [atob, atom, aton, atop, awol]
exp/2026/05/20/inverse-face/docs/31-transfer-activation-3152k-smas1.md:72:11 - Unknown word (atol) -- forward_atol: 0.0
Suggestions: [atob, atom, aton, atop, awol]
src/liblaf/apple/inverse/_diff_forward.py:92:9 - Unknown word (rprecondition) -- def rprecondition(self, p_free: Free)
Suggestions: [precondition, preCondition, PRECONDITION, recondition, rpreconditioner]
src/liblaf/apple/inverse/_diff_forward.py:99:21 - Unknown word (rprecondition) -- return self.rprecondition(p_free)
Suggestions: [precondition, preCondition, PRECONDITION, recondition, rpreconditioner]
CSpell: Files checked: 320, skipped: 5, Issues found: 15 in 9 files.
You can skip this misspellings by defining the following .cspell.json file at the root of your repository
Of course, please correct real typos before :)
{
"version": "0.2",
"language": "en",
"ignorePaths": [
"**/node_modules/**",
"**/vscode-extension/**",
"**/.git/**",
"**/.pnpm-lock.json",
".vscode",
"package-lock.json",
"megalinter-reports"
],
"words": [
"Efat",
"Esmas",
"atol",
"bbox",
"orhun",
"rprecondition"
]
}
You can also copy-paste megalinter-reports/LINTER_DEFAULT at the root of your repository
⚠️ COPYPASTE / jscpd - 464 errors
inverse-segement/src/30-inverse.py [138:39 - 242:24]
Clone found (python):
- exp/2025/08/27/inverse/src/20-forward.py [1:1 - 29:42] (28 lines, 244 tokens)
exp/2025/08/27/inverse-segement/src/20-forward.py [1:1 - 29:43]
Clone found (python):
- exp/2025/08/27/inverse/src/20-forward.py [33:40 - 51:24] (18 lines, 191 tokens)
exp/2025/08/27/inverse-segement/src/20-forward.py [33:30 - 51:24]
Clone found (python):
- exp/2025/08/27/inverse/src/10-gen.py [32:5 - 39:24] (7 lines, 85 tokens)
exp/2025/08/27/inverse-segement/src/10-gen.py [46:5 - 53:24]
Clone found (python):
- exp/2025/07/30/phace/wind/main.py [126:5 - 136:14] (10 lines, 144 tokens)
exp/2025/07/30/dynamics/collision/inter-collision/main.py [132:84 - 142:15]
Clone found (python):
- exp/2025/07/30/phace/wind/main.py [139:9 - 152:46] (13 lines, 156 tokens)
exp/2025/07/30/dynamics/collision/inter-collision/main.py [142:9 - 155:46]
Clone found (python):
- exp/2025/07/30/phace/open-mouth/main.py [9:1 - 19:13] (10 lines, 102 tokens)
exp/2025/07/30/phace/wind/main.py [8:1 - 18:12]
Clone found (python):
- exp/2025/07/30/phace/open-mouth/main.py [24:5 - 36:14] (12 lines, 94 tokens)
exp/2025/07/30/dynamics/collision/collision-bunny-bunny/main.py [19:5 - 31:9]
Clone found (python):
- exp/2025/07/30/phace/open-mouth/main.py [25:21 - 55:12] (30 lines, 315 tokens)
exp/2025/07/30/phace/wind/main.py [30:19 - 60:15]
Clone found (python):
- exp/2025/07/30/phace/open-mouth/main.py [95:85 - 105:33] (10 lines, 148 tokens)
exp/2025/07/30/dynamics/collision/inter-collision/main.py [132:84 - 136:38]
Clone found (python):
- exp/2025/07/30/phace/open-mouth/main.py [105:88 - 119:25] (14 lines, 153 tokens)
exp/2025/07/30/phace/wind/main.py [138:9 - 155:23]
Clone found (python):
- exp/2025/07/30/phace/grin/main.py [1:1 - 12:59] (11 lines, 103 tokens)
exp/2025/07/30/phace/wind/main.py [1:1 - 12:60]
Clone found (python):
- exp/2025/07/30/phace/grin/main.py [19:5 - 36:12] (17 lines, 142 tokens)
exp/2025/07/30/phace/open-mouth/main.py [20:5 - 42:12]
Clone found (python):
- exp/2025/07/30/phace/grin/main.py [101:5 - 107:45] (6 lines, 74 tokens)
exp/2025/07/30/dynamics/collision/inter-collision/main.py [132:84 - 138:36]
Clone found (python):
- exp/2025/07/30/phace/dynamics/main.py [1:1 - 14:29] (13 lines, 106 tokens)
exp/2025/07/30/phace/wind/main.py [1:1 - 15:6]
Clone found (python):
- exp/2025/07/30/phace/dynamics/main.py [35:5 - 53:37] (18 lines, 164 tokens)
exp/2025/07/30/phace/wind/main.py [32:5 - 44:44]
Clone found (python):
- exp/2025/07/30/phace/dynamics/main.py [53:37 - 66:12] (13 lines, 146 tokens)
exp/2025/07/30/phace/grin/main.py [44:44 - 56:11]
Clone found (python):
- exp/2025/07/30/phace/dynamics/main.py [90:54 - 97:67] (7 lines, 77 tokens)
exp/2025/07/30/phace/grin/main.py [90:27 - 97:67]
Clone found (python):
- exp/2025/07/30/phace/dynamics/main.py [107:5 - 117:13] (10 lines, 142 tokens)
exp/2025/07/30/dynamics/collision/inter-collision/main.py [132:84 - 111:26]
Clone found (python):
- exp/2025/07/30/phace/dynamics/main.py [118:81 - 126:43] (8 lines, 101 tokens)
exp/2025/07/30/phace/grin/main.py [112:77 - 120:41]
Clone found (python):
- exp/2025/07/30/phace/collide-ball/main.py [9:1 - 18:26] (9 lines, 95 tokens)
exp/2025/07/30/phace/wind/main.py [9:1 - 19:26]
Clone found (python):
- exp/2025/07/30/phace/collide-ball/main.py [12:60 - 35:40] (23 lines, 195 tokens)
exp/2025/07/30/phace/grin/main.py [12:52 - 36:47]
Clone found (python):
- exp/2025/07/30/phace/collide-ball/main.py [35:40 - 42:66] (7 lines, 122 tokens)
exp/2025/07/30/phace/wind/main.py [41:47 - 48:64]
Clone found (python):
- exp/2025/07/30/phace/close-mouth/main.py [1:1 - 22:12] (21 lines, 180 tokens)
exp/2025/07/30/phace/open-mouth/main.py [1:1 - 21:10]
Clone found (python):
- exp/2025/07/30/phace/close-mouth/main.py [29:5 - 57:12] (28 lines, 311 tokens)
exp/2025/07/30/phace/wind/main.py [32:5 - 60:15]
Clone found (python):
- exp/2025/07/30/phace/close-mouth/main.py [101:5 - 140:21] (39 lines, 450 tokens)
exp/2025/07/30/phace/open-mouth/main.py [55:5 - 124:9]
Clone found (python):
- exp/2025/07/30/phace/close-mouth/main.py [140:47 - 165:46] (25 lines, 356 tokens)
exp/2025/07/30/phace/open-mouth/main.py [94:46 - 155:46]
Clone found (python):
- exp/2025/07/30/dynamics/free-falling/main.py [25:21 - 58:8] (33 lines, 358 tokens)
exp/2025/07/30/dynamics/collision/collision-bunny/main.py [24:19 - 57:11]
Clone found (python):
- exp/2025/07/30/dynamics/free-falling/main.py [78:5 - 84:11] (6 lines, 86 tokens)
exp/2025/07/30/dynamics/collision/collision-bunny/main.py [75:5 - 81:11]
Clone found (python):
- exp/2025/07/30/dynamics/free-falling/main.py [137:5 - 151:14] (14 lines, 138 tokens)
exp/2025/07/30/dynamics/collision/collision-bunny-sphere/main.py [69:5 - 83:14]
Clone found (python):
- exp/2025/04/30/fat-muscle/src/20-simulate.py [17:5 - 30:35] (13 lines, 138 tokens)
exp/2025/04/30/human-head/src/10-simulate.py [18:5 - 31:37]
Clone found (python):
- exp/2025/04/30/fat-muscle/src/20-simulate.py [48:43 - 58:61] (10 lines, 136 tokens)
exp/2025/04/30/human-head/src/10-simulate.py [47:56 - 57:63]
Clone found (python):
- exp/2025/04/30/fat-muscle/src/20-simulate.py [59:60 - 72:3] (13 lines, 107 tokens)
exp/2025/04/30/human-head/src/10-simulate.py [58:62 - 71:4]
Clone found (python):
- exp/2025/04/30/cubic/src/10-gen.py [21:54 - 44:35] (23 lines, 196 tokens)
exp/2025/04/30/human-head/src/10-simulate.py [24:76 - 46:40]
Clone found (python):
- exp/2025/04/30/cubic/src/10-gen.py [44:66 - 71:24] (27 lines, 303 tokens)
exp/2025/04/30/fat-muscle/src/20-simulate.py [46:74 - 73:24]
Clone found (python):
- src/liblaf/apple/warp/fem/_stable_neo_hookean_active.py [57:1 - 63:31] (6 lines, 83 tokens)
src/liblaf/apple/warp/fem/_stable_neo_hookean_active.py [36:67 - 42:13]
Clone found (python):
- src/liblaf/apple/warp/fem/_stable_neo_hookean_active.py [81:46 - 93:11] (12 lines, 171 tokens)
src/liblaf/apple/warp/fem/_stable_neo_hookean_active.py [36:35 - 69:48]
Clone found (python):
- src/liblaf/apple/warp/fem/_stable_neo_hookean_active.py [102:36 - 108:6] (6 lines, 82 tokens)
src/liblaf/apple/warp/fem/_stable_neo_hookean_active.py [21:28 - 26:7]
Clone found (python):
- src/liblaf/apple/warp/fem/_stable_neo_hookean_active.py [103:14 - 116:12] (13 lines, 166 tokens)
src/liblaf/apple/warp/fem/_stable_neo_hookean_active.py [57:11 - 94:12]
Clone found (python):
- src/liblaf/apple/warp/fem/_stable_neo_hookean.py [25:18 - 35:7] (10 lines, 126 tokens)
src/liblaf/apple/warp/fem/_stable_neo_hookean_active.py [27:18 - 37:10]
Clone found (python):
- src/liblaf/apple/warp/fem/_stable_neo_hookean.py [74:78 - 84:12] (10 lines, 127 tokens)
src/liblaf/apple/warp/fem/_stable_neo_hookean.py [53:1 - 63:48]
Clone found (python):
- src/liblaf/apple/warp/fem/_stable_neo_hookean.py [93:14 - 103:12] (10 lines, 121 tokens)
src/liblaf/apple/warp/fem/_stable_neo_hookean.py [53:11 - 63:48]
Clone found (python):
- src/liblaf/apple/warp/fem/_stable_neo_hookean.py [116:43 - 150:6] (34 lines, 323 tokens)
src/liblaf/apple/warp/fem/_stable_neo_hookean_active.py [135:10 - 169:6]
Clone found (python):
- src/liblaf/apple/warp/fem/_neo_hookean.py [1:1 - 28:18] (27 lines, 251 tokens)
src/liblaf/apple/warp/fem/_stable_neo_hookean.py [1:1 - 28:17]
Clone found (python):
- src/liblaf/apple/warp/fem/_neo_hookean.py [29:51 - 39:17] (10 lines, 105 tokens)
src/liblaf/apple/warp/fem/_stable_neo_hookean.py [29:58 - 39:17]
Clone found (python):
- src/liblaf/apple/warp/fem/_neo_hookean.py [39:44 - 60:17] (21 lines, 193 tokens)
src/liblaf/apple/warp/fem/_stable_neo_hookean.py [39:47 - 60:17]
Clone found (python):
- src/liblaf/apple/warp/fem/_neo_hookean.py [62:63 - 84:12] (22 lines, 280 tokens)
src/liblaf/apple/warp/fem/_stable_neo_hookean.py [62:22 - 63:48]
Clone found (python):
- src/liblaf/apple/warp/fem/_neo_hookean.py [83:63 - 103:12] (20 lines, 280 tokens)
src/liblaf/apple/warp/fem/_stable_neo_hookean.py [83:22 - 63:48]
Clone found (python):
- src/liblaf/apple/warp/fem/_neo_hookean.py [102:63 - 110:17] (8 lines, 92 tokens)
src/liblaf/apple/warp/fem/_stable_neo_hookean.py [102:22 - 110:23]
Clone found (python):
- src/liblaf/apple/warp/fem/_neo_hookean.py [110:17 - 150:6] (40 lines, 380 tokens)
src/liblaf/apple/warp/fem/_stable_neo_hookean.py [110:23 - 169:6]
Clone found (python):
- src/liblaf/apple/warp/fem/_base.py [189:37 - 196:14] (7 lines, 90 tokens)
src/liblaf/apple/warp/fem/_base.py [166:40 - 173:19]
Clone found (python):
- src/liblaf/apple/warp/fem/_base.py [211:31 - 218:16] (7 lines, 92 tokens)
src/liblaf/apple/warp/fem/_base.py [166:31 - 173:19]
Clone found (python):
- src/liblaf/apple/warp/fem/_base.py [235:36 - 243:22] (8 lines, 108 tokens)
src/liblaf/apple/warp/fem/_base.py [166:40 - 197:19]
Clone found (python):
- src/liblaf/apple/warp/fem/_base.py [266:9 - 272:19] (6 lines, 86 tokens)
src/liblaf/apple/warp/fem/_base.py [167:9 - 173:19]
Clone found (python):
- src/liblaf/apple/warp/fem/_base.py [292:14 - 300:19] (8 lines, 102 tokens)
src/liblaf/apple/warp/fem/_base.py [262:14 - 270:22]
Clone found (python):
- src/liblaf/apple/warp/fem/_base.py [327:9 - 334:19] (7 lines, 103 tokens)
src/liblaf/apple/warp/fem/_base.py [296:9 - 303:19]
Clone found (python):
- src/liblaf/apple/warp/fem/_arap.py [7:33 - 22:7] (15 lines, 106 tokens)
src/liblaf/apple/warp/fem/_stable_neo_hookean.py [7:41 - 22:7]
Clone found (python):
- src/liblaf/apple/warp/fem/_arap.py [89:53 - 121:6] (32 lines, 288 tokens)
src/liblaf/apple/warp/fem/_stable_neo_hookean_active.py [137:55 - 169:6]
Clone found (python):
- exp/2025/07/30/static/stretch.py [12:5 - 19:52] (7 lines, 105 tokens)
exp/2025/07/30/static/random/main.py [19:5 - 25:53]
Clone found (python):
- exp/2025/07/30/static/stretch.py [28:9 - 39:30] (11 lines, 124 tokens)
exp/2025/07/30/static/random/main.py [40:9 - 51:35]
Clone found (python):
- exp/2025/07/30/static/stretch.py [49:1 - 54:10] (5 lines, 83 tokens)
exp/2025/07/30/static/random/main.py [60:44 - 65:10]
Clone found (python):
- exp/2025/07/30/static/stretch.py [67:5 - 77:14] (10 lines, 115 tokens)
exp/2025/07/30/static/random/main.py [73:5 - 83:10]
Clone found (python):
- tests/forward/test_static_simulation.py [77:31 - 85:11] (8 lines, 80 tokens)
exp/2026/05/06/toy/src/10-stretched-cylinder.py [84:43 - 92:17]
Clone found (python):
- benches/test_aggregation.py [115:9 - 129:11] (14 lines, 161 tokens)
benches/test_aggregation.py [68:88 - 80:92]
Clone found (python):
- benches/bench_pncg_branching_backends.py [180:20 - 192:8] (12 lines, 87 tokens)
benches/bench_pncg_branching_backends.py [141:14 - 153:9]
Clone found (python):
- benches/bench_pncg_branching_backends.py [347:9 - 357:11] (10 lines, 94 tokens)
benches/bench_pncg_branching_backends.py [279:9 - 289:13]
Clone found (python):
- benches/bench_pncg_branching_backends.py [459:40 - 481:6] (22 lines, 172 tokens)
benches/bench_pncg_branching_backends.py [413:34 - 435:18]
Clone found (python):
- benches/bench_pncg_branching_backends.py [649:25 - 663:22] (14 lines, 159 tokens)
benches/bench_pncg_branching_backends.py [475:23 - 489:25]
┌────────┬────────────────┬─────────────┬──────────────┬──────────────┬──────────────────┬───────────────────┐
│ Format │ Files analyzed │ Total lines │ Total tokens │ Clones found │ Duplicated lines │ Duplicated tokens │
├────────┼────────────────┼─────────────┼──────────────┼──────────────┼──────────────────┼───────────────────┤
│ python │ 190 │ 28966 │ 294565 │ 464 │ 11952 (41.26%) │ 125342 (42.55%) │
├────────┼────────────────┼─────────────┼──────────────┼──────────────┼──────────────────┼───────────────────┤
│ csv │ 1 │ 15 │ 813 │ 0 │ 0 (0%) │ 0 (0%) │
├────────┼────────────────┼─────────────┼──────────────┼──────────────┼──────────────────┼───────────────────┤
│ bash │ 2 │ 45 │ 136 │ 0 │ 0 (0%) │ 0 (0%) │
├────────┼────────────────┼─────────────┼──────────────┼──────────────┼──────────────────┼───────────────────┤
│ toml │ 8 │ 933 │ 4016 │ 0 │ 0 (0%) │ 0 (0%) │
├────────┼────────────────┼─────────────┼──────────────┼──────────────┼──────────────────┼───────────────────┤
│ Total: │ 201 │ 29959 │ 299530 │ 464 │ 11952 (39.89%) │ 125342 (41.85%) │
└────────┴────────────────┴─────────────┴──────────────┴──────────────┴──────────────────┴───────────────────┘
Found 464 clones.
HTML report saved to megalinter-reports/copy-paste/html/
ERROR: jscpd found too many duplicates (39.89%) over threshold (0%)
Error: ERROR: jscpd found too many duplicates (39.89%) over threshold (0%)
at ThresholdReporter.report (/node-deps/node_modules/@jscpd/finder/dist/index.js:615:13)
at /node-deps/node_modules/@jscpd/finder/dist/index.js:109:18
at Array.forEach (<anonymous>)
at /node-deps/node_modules/@jscpd/finder/dist/index.js:108:22
at async /node-deps/node_modules/jscpd/dist/bin/jscpd.js:9:5
(Truncated to last 13333 characters out of 92386)
⚠️ PYTHON / ruff - 47 errors
able first
--> exp/2026/01/28/smas/src/20-forward-ext-force-stable-neo-hookean-ramped.py:206:21
|
204 | if not stage_result.solver_result.success:
205 | raise RuntimeError(
206 | / "forward stage failed at "
207 | | f"force scale {force_scale:g} with status "
208 | | f"{stage_result.solver_result.status}"
| |__________________________________________________________^
209 | )
210 | cherries.set_step(stage_index)
|
help: Assign to variable; remove f-string literal
RUF046 Value being cast to `int` is already an integer
--> exp/2026/01/28/smas/src/20-forward-ext-force-stable-neo-hookean-smas-only.py:48:20
|
46 | def format_lambda_value(lambda_value: float) -> str:
47 | if np.isclose(lambda_value, round(lambda_value)):
48 | return str(int(round(lambda_value)))
| ^^^^^^^^^^^^^^^^^^^^^^^^
49 | mantissa, exponent = f"{lambda_value:.0e}".split("e")
50 | return f"{mantissa}e{int(exponent)}"
|
help: Remove unnecessary `int` call
TRY003 Avoid specifying long messages outside the exception class
--> exp/2026/01/28/smas/src/20-forward-ext-force-stable-neo-hookean-smas-only.py:57:15
|
55 | ) -> pv.UnstructuredGrid:
56 | if "Force" not in mesh.point_data:
57 | raise KeyError(
| _______________^
58 | | "mesh is missing point_data['Force']; run 11-smas-bottom-force.py first"
59 | | )
| |_________^
60 | mesh.point_data["Force"] = force_scale * np.asarray(mesh.point_data["Force"])
61 | return mesh
|
EM101 Exception must not use a string literal, assign to variable first
--> exp/2026/01/28/smas/src/20-forward-ext-force-stable-neo-hookean-smas-only.py:58:13
|
56 | if "Force" not in mesh.point_data:
57 | raise KeyError(
58 | "mesh is missing point_data['Force']; run 11-smas-bottom-force.py first"
| ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
59 | )
60 | mesh.point_data["Force"] = force_scale * np.asarray(mesh.point_data["Force"])
|
help: Assign to variable; remove string literal
RUF046 Value being cast to `int` is already an integer
--> exp/2026/01/28/smas/src/20-forward-ext-force-stable-neo-hookean.py:49:20
|
47 | def format_lambda_value(lambda_value: float) -> str:
48 | if np.isclose(lambda_value, round(lambda_value)):
49 | return str(int(round(lambda_value)))
| ^^^^^^^^^^^^^^^^^^^^^^^^
50 | mantissa, exponent = f"{lambda_value:.0e}".split("e")
51 | return f"{mantissa}e{int(exponent)}"
|
help: Remove unnecessary `int` call
RUF046 Value being cast to `int` is already an integer
--> exp/2026/01/28/smas/src/20-forward-ext-force.py:49:20
|
47 | def format_lambda_value(lambda_value: float) -> str:
48 | if np.isclose(lambda_value, round(lambda_value)):
49 | return str(int(round(lambda_value)))
| ^^^^^^^^^^^^^^^^^^^^^^^^
50 | mantissa, exponent = f"{lambda_value:.0e}".split("e")
51 | return f"{mantissa}e{int(exponent)}"
|
help: Remove unnecessary `int` call
ARG001 Unused function argument: `failure_dir`
--> exp/2026/01/28/smas/src/30-inverse-unreachable-stable-neo-hookean.py:286:5
|
284 | target: pv.UnstructuredGrid,
285 | forward: Forward,
286 | failure_dir: Path,
| ^^^^^^^^^^^
287 | ) -> MyInverse:
288 | surface_indices: Integer[Array, " surface_points"] = mesh.surface_indices()
|
D205 1 blank line required between summary line and description
--> exp/2026/04/18/2d-demo/src/10-simulation.py:1:1
|
1 | / """2D Muscle-Fascia Neohookean FEM Simulation
2 | | ==========================================
3 | |
4 | | Simulates a flat meat slab (100x11 elements) with a stiff fascia middle layer.
5 | | Uses analytical First Piola-Kirchhoff stress with NumPy vectorized computation.
6 | | Real-time visualization with Pygame.
7 | |
8 | | Material: Neohookean hyperelastic
9 | | Psi(F) = mu/2 * (tr(F^T F) - 2) - mu * ln(J) + lam/2 * (ln J)^2
10 | | P = mu * (F - F^{-T}) + lam * ln(J) * F^{-T}
11 | |
12 | | Controls:
13 | | Up/Down Increase/decrease wind force
14 | | R Reset simulation
15 | | SPACE Pause/resume
16 | | W Toggle wireframe overlay
17 | | ESC Quit
18 | | """
| |___^
19 |
20 | import sys
|
help: Insert single blank line
D415 First line should end with a period, question mark, or exclamation point
--> exp/2026/04/18/2d-demo/src/10-simulation.py:1:1
|
1 | / """2D Muscle-Fascia Neohookean FEM Simulation
2 | | ==========================================
3 | |
4 | | Simulates a flat meat slab (100x11 elements) with a stiff fascia middle layer.
5 | | Uses analytical First Piola-Kirchhoff stress with NumPy vectorized computation.
6 | | Real-time visualization with Pygame.
7 | |
8 | | Material: Neohookean hyperelastic
9 | | Psi(F) = mu/2 * (tr(F^T F) - 2) - mu * ln(J) + lam/2 * (ln J)^2
10 | | P = mu * (F - F^{-T}) + lam * ln(J) * F^{-T}
11 | |
12 | | Controls:
13 | | Up/Down Increase/decrease wind force
14 | | R Reset simulation
15 | | SPACE Pause/resume
16 | | W Toggle wireframe overlay
17 | | ESC Quit
18 | | """
| |___^
19 |
20 | import sys
|
help: Add closing punctuation
ANN001 Missing type annotation for function argument `f2v`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:126:16
|
126 | def init_state(f2v):
| ^^^
127 | """Initialize node positions and precompute reference configuration.
|
ANN001 Missing type annotation for function argument `pos`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:185:28
|
185 | def compute_elastic_forces(pos, f2v, Dm_inv, Dm_inv_T, W, elem_mu, elem_lam):
| ^^^
186 | """Compute internal elastic forces using the analytical Neohookean stress.
|
ANN001 Missing type annotation for function argument `f2v`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:185:33
|
185 | def compute_elastic_forces(pos, f2v, Dm_inv, Dm_inv_T, W, elem_mu, elem_lam):
| ^^^
186 | """Compute internal elastic forces using the analytical Neohookean stress.
|
ANN001 Missing type annotation for function argument `Dm_inv`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:185:38
|
185 | def compute_elastic_forces(pos, f2v, Dm_inv, Dm_inv_T, W, elem_mu, elem_lam):
| ^^^^^^
186 | """Compute internal elastic forces using the analytical Neohookean stress.
|
ANN001 Missing type annotation for function argument `Dm_inv_T`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:185:46
|
185 | def compute_elastic_forces(pos, f2v, Dm_inv, Dm_inv_T, W, elem_mu, elem_lam):
| ^^^^^^^^
186 | """Compute internal elastic forces using the analytical Neohookean stress.
|
ANN001 Missing type annotation for function argument `W`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:185:56
|
185 | def compute_elastic_forces(pos, f2v, Dm_inv, Dm_inv_T, W, elem_mu, elem_lam):
| ^
186 | """Compute internal elastic forces using the analytical Neohookean stress.
|
ANN001 Missing type annotation for function argument `elem_mu`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:185:59
|
185 | def compute_elastic_forces(pos, f2v, Dm_inv, Dm_inv_T, W, elem_mu, elem_lam):
| ^^^^^^^
186 | """Compute internal elastic forces using the analytical Neohookean stress.
|
ANN001 Missing type annotation for function argument `elem_lam`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:185:68
|
185 | def compute_elastic_forces(pos, f2v, Dm_inv, Dm_inv_T, W, elem_mu, elem_lam):
| ^^^^^^^^
186 | """Compute internal elastic forces using the analytical Neohookean stress.
|
ANN001 Missing type annotation for function argument `pos`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:256:5
|
255 | def substep(
256 | pos,
| ^^^
257 | vel,
258 | rest_pos,
|
ANN001 Missing type annotation for function argument `vel`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:257:5
|
255 | def substep(
256 | pos,
257 | vel,
| ^^^
258 | rest_pos,
259 | f2v,
|
ANN001 Missing type annotation for function argument `rest_pos`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:258:5
|
256 | pos,
257 | vel,
258 | rest_pos,
| ^^^^^^^^
259 | f2v,
260 | Dm_inv,
|
ANN001 Missing type annotation for function argument `f2v`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:259:5
|
257 | vel,
258 | rest_pos,
259 | f2v,
| ^^^
260 | Dm_inv,
261 | Dm_inv_T,
|
ANN001 Missing type annotation for function argument `Dm_inv`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:260:5
|
258 | rest_pos,
259 | f2v,
260 | Dm_inv,
| ^^^^^^
261 | Dm_inv_T,
262 | W,
|
ANN001 Missing type annotation for function argument `Dm_inv_T`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:261:5
|
259 | f2v,
260 | Dm_inv,
261 | Dm_inv_T,
| ^^^^^^^^
262 | W,
263 | elem_mu,
|
ANN001 Missing type annotation for function argument `W`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:262:5
|
260 | Dm_inv,
261 | Dm_inv_T,
262 | W,
| ^
263 | elem_mu,
264 | elem_lam,
|
ANN001 Missing type annotation for function argument `elem_mu`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:263:5
|
261 | Dm_inv_T,
262 | W,
263 | elem_mu,
| ^^^^^^^
264 | elem_lam,
265 | fixed_mask,
|
ANN001 Missing type annotation for function argument `elem_lam`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:264:5
|
262 | W,
263 | elem_mu,
264 | elem_lam,
| ^^^^^^^^
265 | fixed_mask,
266 | bottom_mask,
|
ANN001 Missing type annotation for function argument `fixed_mask`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:265:5
|
263 | elem_mu,
264 | elem_lam,
265 | fixed_mask,
| ^^^^^^^^^^
266 | bottom_mask,
267 | wind,
|
ANN001 Missing type annotation for function argument `bottom_mask`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:266:5
|
264 | elem_lam,
265 | fixed_mask,
266 | bottom_mask,
| ^^^^^^^^^^^
267 | wind,
268 | mass,
|
ANN001 Missing type annotation for function argument `wind`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:267:5
|
265 | fixed_mask,
266 | bottom_mask,
267 | wind,
| ^^^^
268 | mass,
269 | ):
|
ANN001 Missing type annotation for function argument `mass`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:268:5
|
266 | bottom_mask,
267 | wind,
268 | mass,
| ^^^^
269 | ):
270 | """Single substep of Symplectic Euler integration.
|
ANN001 Missing type annotation for function argument `sim_pos`
--> exp/2026/04/18/2d-demo/src/10-simulation.py:307:19
|
307 | def sim_to_screen(sim_pos):
| ^^^^^^^
308 | """Convert simulation coordinates to screen pixel coordinates (y-flipped)."""
309 | screen = np.empty_like(sim_pos)
|
C901 `main` is too complex (18 > 10)
--> exp/2026/04/18/2d-demo/src/10-simulation.py:320:5
|
320 | def main():
| ^^^^
321 | # --- Build mesh & initialize state ---
322 | f2v, is_fascia, elem_mu, elem_lam = build_mesh()
|
PLR0912 Too many branches (17 > 12)
--> exp/2026/04/18/2d-demo/src/10-simulation.py:320:5
|
320 | def main():
| ^^^^
321 | # --- Build mesh & initialize state ---
322 | f2v, is_fascia, elem_mu, elem_lam = build_mesh()
|
PLR0915 Too many statements (57 > 50)
--> exp/2026/04/18/2d-demo/src/10-simulation.py:320:5
|
320 | def main():
| ^^^^
321 | # --- Build mesh & initialize state ---
322 | f2v, is_fascia, elem_mu, elem_lam = build_mesh()
|
FBT003 Boolean positional value in function call
--> exp/2026/04/18/2d-demo/src/10-simulation.py:431:37
|
429 | y_pos = 12
430 | for fnt, text, color in hud_lines:
431 | surf = fnt.render(text, True, color)
| ^^^^
432 | screen.blit(surf, (15, y_pos))
433 | y_pos += 28
|
B007 Loop control variable `step` not used within loop body
--> exp/2026/04/18/2d-demo/src/30-simulation-stable-neo-hookean-self-collision.py:829:9
|
827 | contact_points = np.empty((0, 2), dtype=pos.dtype)
828 |
829 | for step in range(SUBSTEPS):
| ^^^^
830 | substep_contacts, substep_points = substep(
831 | pos,
|
help: Rename unused `step` to `_step`
Found 47 errors.
No fixes available (13 hidden fixes can be enabled with the `--unsafe-fixes` option).
(Truncated to last 13333 characters out of 18919)
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