diff --git a/README.md b/README.md
index 2ff9d27..18eb84b 100644
--- a/README.md
+++ b/README.md
@@ -1,5 +1,5 @@
 [![Tests](https://github.com/krishnanlab/PyGenePlexus/actions/workflows/tests.yml/badge.svg)](https://github.com/krishnanlab/PyGenePlexus/actions/workflows/tests.yml)
-[![Documentation Status](https://readthedocs.org/projects/pygeneplexus/badge/?version=v3.0.0)](https://pygeneplexus.readthedocs.io/en/v3.0.0/?badge=v3.0.0)
+[![Documentation Status](https://readthedocs.org/projects/pygeneplexus/badge/?version=v3.0.1)](https://pygeneplexus.readthedocs.io/en/v3.0.1/?badge=v3.0.1)
 [![PyPI](https://img.shields.io/pypi/v/geneplexus)](https://pypi.org/project/geneplexus/)
 ![PyPI - Python Version](https://img.shields.io/pypi/pyversions/geneplexus)
 [![License](https://img.shields.io/badge/License-BSD_3--Clause-blue.svg)](https://opensource.org/licenses/BSD-3-Clause)
diff --git a/docs/source/conf.py b/docs/source/conf.py
index 4ea8e70..bd480e1 100644
--- a/docs/source/conf.py
+++ b/docs/source/conf.py
@@ -22,7 +22,7 @@
 author = 'Remy Liu and Christopher A. Mancuso'
 
 # The full version, including alpha/beta/rc tags
-release = '3.0.0'
+release = '3.0.1'
 
 
 # -- General configuration ---------------------------------------------------
diff --git a/geneplexus/__init__.py b/geneplexus/__init__.py
index 5b72b77..352e823 100644
--- a/geneplexus/__init__.py
+++ b/geneplexus/__init__.py
@@ -125,5 +125,5 @@
 from .geneplexus import GenePlexus
 
 
-__version__ = "3.0.0"
+__version__ = "3.0.1"
 __all__ = ["download", "GenePlexus", "util", "config"]
diff --git a/setup.cfg b/setup.cfg
index 6b45a39..8174d6d 100644
--- a/setup.cfg
+++ b/setup.cfg
@@ -1,6 +1,6 @@
 [metadata]
 name = geneplexus
-version = 3.0.0
+version = 3.0.1
 description = Network based gene classification
 long_description = file: README.md
 long_description_content_type = text/markdown