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refactor: restructure diagram module and add Sphinx directive #690

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Job	Run time
build (3.12)	1m 58s
build (3.14)	1m 19s
build (3.11)	1m 52s
build (3.13)	1m 58s
build (3.9)	2m 14s
build (3.10)	2m 0s
	11m 21s