add infectious detail

avallecam · avallecam · commit b11a25465b9c · 2025-11-20T16:24:19.000Z
diff --git a/episodes/simulating-transmission.Rmd b/episodes/simulating-transmission.Rmd
@@ -278,7 +278,7 @@ We combine the three initial conditions vectors into one matrix,
 ```{r initial_conditions}
 # combine the initial conditions into a matrix class object
 initial_conditions <- rbind(
-  initial_conditions_inf, # age group 1
+  initial_conditions_inf, # age group 1 (only group with infectious)
   initial_conditions_free, # age group 2
   initial_conditions_free # age group 3
 )

Original file line number	Diff line number	Diff line change
`@@ -278,7 +278,7 @@ We combine the three initial conditions vectors into one matrix,`
`278`	`278`	```{r initial_conditions}
`279`	`279`	`# combine the initial conditions into a matrix class object`
`280`	`280`	`initial_conditions <- rbind(`
`281`		`- initial_conditions_inf, # age group 1`
	`281`	`+ initial_conditions_inf, # age group 1 (only group with infectious)`
`282`	`282`	`initial_conditions_free, # age group 2`
`283`	`283`	`initial_conditions_free # age group 3`
`284`	`284`	`)`