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install with bioconda

https://travis-ci.org/cmap/cmapPy.svg?branch=master Documentation Status

cmapPy: Tools for interacting with .gctx and .gct files, and other Connectivity Map resources

Connectivity Map, Broad Institute of MIT and Harvard

This repo is no longer actively maintained please consider using this fork instead: https://github.com/dllahr/cmapPy

Documentation: https://clue.io/cmapPy/index.html

Citation

If you use cmapPy and/or GCTx for your research, please cite Enache et al.