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Commit 6fe7ec9

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author
Oliver Scott
committed
Spelling mistake fix.
1 parent 0e7a72a commit 6fe7ec9

5 files changed

Lines changed: 10 additions & 10 deletions

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scaffoldgraph/core/fragment.py

Lines changed: 3 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -27,7 +27,7 @@
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)
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from scaffoldgraph.core.scaffold import Scaffold
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from scaffoldgraph.utils import supress_rdlogger
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from scaffoldgraph.utils import suppress_rdlogger
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class Fragmenter(ABC):
@@ -665,7 +665,7 @@ def get_annotated_murcko_scaffold(mol, scaffold=None, as_mol=True):
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return MolToSmiles(annotated)
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@supress_rdlogger()
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@suppress_rdlogger()
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def get_next_murcko_fragments(murcko_scaffold, break_fused_rings=True):
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"""
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Fragment a scaffold into its next set of Murcko fragments.
@@ -695,7 +695,7 @@ def get_next_murcko_fragments(murcko_scaffold, break_fused_rings=True):
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# fragmenter is hierarchical so all fragments may not be returned (fix?).
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@supress_rdlogger()
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@suppress_rdlogger()
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def get_all_murcko_fragments(mol, break_fused_rings=True):
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"""
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Get all possible murcko fragments from a molecule through

scaffoldgraph/core/graph.py

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Original file line numberDiff line numberDiff line change
@@ -19,7 +19,7 @@
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from rdkit.Chem.rdMolDescriptors import CalcNumRings
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from scaffoldgraph.io import *
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from scaffoldgraph.utils import canonize_smiles, supress_rdlogger
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from scaffoldgraph.utils import canonize_smiles, suppress_rdlogger
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from .fragment import (
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get_murcko_scaffold,
@@ -146,7 +146,7 @@ def __init__(self, graph=None, fragmenter=None, graph_type=None, **attr):
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self.graph.setdefault('num_filtered', 0) # track number of filtered mols.
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self.fragmenter = fragmenter
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@supress_rdlogger()
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@suppress_rdlogger()
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def _construct(self, molecules, init_args, ring_cutoff=10, progress=False):
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"""Private method for graph construction, called by constructors.
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scaffoldgraph/tree.py

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -8,7 +8,7 @@
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from .core import ScaffoldGraph, Scaffold, MurckoRingFragmenter
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from .core.fragment import get_murcko_scaffold
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from .prioritization import original_ruleset
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from .utils import supress_rdlogger
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from .utils import suppress_rdlogger
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class ScaffoldTree(ScaffoldGraph):
@@ -113,7 +113,7 @@ def prioritization_rules(self):
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return self.rules
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@supress_rdlogger()
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@suppress_rdlogger()
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def tree_frags_from_mol(mol, prioritization_rules=None):
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"""Generate a scaffold tree from a single molecule without using networkx.
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scaffoldgraph/utils/__init__.py

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -4,11 +4,11 @@
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from .misc import canonize_smiles, summary
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from .aggregate import aggregate
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from .logging import supress_rdlogger
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from .logging import suppress_rdlogger
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__all__ = [
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'canonize_smiles',
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'aggregate',
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'summary',
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'supress_rdlogger',
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'suppress_rdlogger',
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]

scaffoldgraph/utils/logging.py

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -36,7 +36,7 @@ def set_rdlogger_status(status_dict):
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rdBase.DisableLog(level)
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def supress_rdlogger(
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def suppress_rdlogger(
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suppress_info=True,
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suppress_warning=True,
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suppress_error=True,

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