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Merge pull request #22 from TRON-Bioinformatics/bump-vafator2
Bump vafator to v3.0.0
2 parents 90eca4a + 8f19d4e commit f9e0b42

1 file changed

Lines changed: 2 additions & 2 deletions

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modules/04_vafator.nf

Lines changed: 2 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -12,7 +12,7 @@ process VAFATOR {
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tag "${patient_name}"
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publishDir "${params.output}/${patient_name}", mode: "copy"
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conda (params.enable_conda ? "bioconda::vafator=2.2.0" : null)
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conda (params.enable_conda ? "bioconda::vafator=3.0.0" : null)
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input:
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tuple val(patient_name), file(vcf), val(bams), val(purities), val(clonalities)
@@ -41,7 +41,7 @@ process MULTIALLELIC_FILTER {
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tag "${name}"
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publishDir "${params.output}/${name}", mode: "copy"
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conda (params.enable_conda ? "bioconda::vafator=2.2.0" : null)
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conda (params.enable_conda ? "bioconda::vafator=3.0.0" : null)
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input:
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tuple val(name), file(vcf)

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