scCCESS/CITATION.cff at master · PYangLab/scCCESS · GitHub

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cff-version: 1.2.0
message: "If you use scCCESS, please cite the relevant method papers."
title: "scCCESS: Single-cell Consensus Clusters of Encoded Subspaces"
version: 0.3.3
license: GPL-3.0-only
repository-code: "https://github.com/PYangLab/scCCESS"
authors:
  - family-names: Geddes
    given-names: "Thomas A."
  - family-names: Yu
    given-names: Lijia
  - family-names: Yang
    given-names: Pengyi
preferred-citation:
  type: article
  title: "Benchmarking clustering algorithms on estimating the number of cell types from single-cell RNA-sequencing data"
  authors:
    - family-names: Yu
      given-names: Lijia
    - family-names: Cao
      given-names: Yue
    - family-names: Yang
      given-names: "Jean Yee Hwa"
    - family-names: Yang
      given-names: Pengyi
  journal: "Genome Biology"
  year: 2022
  volume: 23
  issue: 1
  article-number: 49
  doi: "10.1186/s13059-022-02622-0"
  url: "https://doi.org/10.1186/s13059-022-02622-0"
references:
  - type: article
    title: "Autoencoder-based cluster ensembles for single-cell RNA-seq data analysis"
    authors:
      - family-names: Geddes
        given-names: "Thomas A."
      - family-names: Kim
        given-names: Taiyun
      - family-names: Nan
        given-names: Lihao
      - family-names: Burchfield
        given-names: "James G."
      - family-names: Yang
        given-names: "Jean Yee Hwa"
      - family-names: Tao
        given-names: Dacheng
      - family-names: Yang
        given-names: Pengyi
    journal: "BMC Bioinformatics"
    year: 2019
    volume: 20
    issue: 1
    article-number: 660
    doi: "10.1186/s12859-019-3179-5"
    url: "https://doi.org/10.1186/s12859-019-3179-5"