Added steps for renaming bucket

Author: aolveraNIH

GoogleCloud/Submodule_04_google_batch_assembly.ipynb

@@ -193,12 +193,31 @@
     "myBucketName"
    ]
   },
+  {
+   "cell_type": "markdown",
+   "id": "73e9985d",
+   "metadata": {},
+   "source": [
+    "**Step 4b:** Replace names in files with personal bucket and project names. "
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": null,
+   "id": "860238b5",
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "! sed -i \"s/<YOUR-PROJECT-ID>/$myProject/g\" nextflow.config\n",
+    "! sed - \"s/<YOUR-BUCKET-NAME>/$myBucketName/g\" conf/test_params.config"
+   ]
+  },
   {
    "cell_type": "markdown",
    "id": "5676e5d2-f556-463e-93c2-5add30f1fff8",
    "metadata": {},
    "source": [
-    "**Step 4b:** Create a new GCS bucket. *If you are using an existing bucket, you can skip this step.*\n",
+    "**Step 4c:** Create a new GCS bucket. *If you are using an existing bucket, you can skip this step.*\n",
     "> To do this, we can use a new `gsutil` command: `mb` which stands for make bucket."
    ]
   },
@@ -598,7 +617,11 @@
    ]
   }
  ],
- "metadata": {},
+ "metadata": {
+  "language_info": {
+   "name": "python"
+  }
+ },
  "nbformat": 4,
  "nbformat_minor": 5
 }